Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
---|---|
Accession | NC_008819 |
Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is ftnA [H]
Identifier: 124025551
GI number: 124025551
Start: 775814
End: 776365
Strand: Direct
Name: ftnA [H]
Synonym: NATL1_08441
Alternate gene names: 124025551
Gene position: 775814-776365 (Clockwise)
Preceding gene: 124025550
Following gene: 124025555
Centisome position: 41.6
GC content: 36.59
Gene sequence:
>552_bases ATGCAATTATCTACATCCAATTCAATAGGCCTTAACGTTGGTCCTTCAGGCCGTGCCATTGCACAGCCGATGGATGTTGA CCTTCTTGAGGCCCTTTATCAACATACTTCTCTTGAAAGGGTTTCAAGCGCACAATATTTGGCGATGTCCCTTTGGTTCC TAGAAAGAGAATTAAGAGGATTCTCTTCATTTTTCAAGAAAGAGTCTTTATCTGAGCAAGAGCATGGATTTAACTTCGCT AAATACATGATTGCTCGAGGTCAAACTGTTGAACTTGAAGAAGTAACTAAACCAATACAAGAATGGAAGACAGTTCAAGA ATTAGTAACTTTGTCTTTCCAAATGGAGTCTGACGTTACAACATCTGTTCAGCAGCTTTATTCATTAGCAGAAAGATCAA ATGACACTCGTACAACGGTATTCCTCGATCCAGTTATAGACGAGCAAATTAAAGCAGAAGATGAAATGGCTTATTTACTT GGTAAAGTCAAATTTGCTAATAATGATCCTTCAGCATTGTTTATTATTGATAATGAATTAAAGATAAATTAA
Upstream 100 bases:
>100_bases TATATTTAAATGCCTTTACGTCGAAATGATACAAAATCAGTTATTATTTATTTGAACAAAAAATTAGTTTTTGCGTTCTT TGACCTAGCTTTTTTTTGTT
Downstream 100 bases:
>100_bases ATTTATCTTTTCGTTGAACTTATATTTGTTGAAAAGAATTAGATCTTTTAGTTATTTCTAGTAGGAATTCTAATGATAAA TCCTGAGAATTTGTTTTAAA
Product: ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MQLSTSNSIGLNVGPSGRAIAQPMDVDLLEALYQHTSLERVSSAQYLAMSLWFLERELRGFSSFFKKESLSEQEHGFNFA KYMIARGQTVELEEVTKPIQEWKTVQELVTLSFQMESDVTTSVQQLYSLAERSNDTRTTVFLDPVIDEQIKAEDEMAYLL GKVKFANNDPSALFIIDNELKIN
Sequences:
>Translated_183_residues MQLSTSNSIGLNVGPSGRAIAQPMDVDLLEALYQHTSLERVSSAQYLAMSLWFLERELRGFSSFFKKESLSEQEHGFNFA KYMIARGQTVELEEVTKPIQEWKTVQELVTLSFQMESDVTTSVQQLYSLAERSNDTRTTVFLDPVIDEQIKAEDEMAYLL GKVKFANNDPSALFIIDNELKIN >Mature_183_residues MQLSTSNSIGLNVGPSGRAIAQPMDVDLLEALYQHTSLERVSSAQYLAMSLWFLERELRGFSSFFKKESLSEQEHGFNFA KYMIARGQTVELEEVTKPIQEWKTVQELVTLSFQMESDVTTSVQQLYSLAERSNDTRTTVFLDPVIDEQIKAEDEMAYLL GKVKFANNDPSALFIIDNELKIN
Specific function: May alleviate iron toxicity in the presence of oxygen [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 20799; Mature: 20799
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSTSNSIGLNVGPSGRAIAQPMDVDLLEALYQHTSLERVSSAQYLAMSLWFLERELRG CCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSFFKKESLSEQEHGFNFAKYMIARGQTVELEEVTKPIQEWKTVQELVTLSFQMESDVT HHHHHHHHCCCHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TSVQQLYSLAERSNDTRTTVFLDPVIDEQIKAEDEMAYLLGKVKFANNDPSALFIIDNEL HHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCE KIN ECC >Mature Secondary Structure MQLSTSNSIGLNVGPSGRAIAQPMDVDLLEALYQHTSLERVSSAQYLAMSLWFLERELRG CCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSFFKKESLSEQEHGFNFAKYMIARGQTVELEEVTKPIQEWKTVQELVTLSFQMESDVT HHHHHHHHCCCHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TSVQQLYSLAERSNDTRTTVFLDPVIDEQIKAEDEMAYLLGKVKFANNDPSALFIIDNEL HHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCE KIN ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA