| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025542
Identifier: 124025542
GI number: 124025542
Start: 767008
End: 768603
Strand: Reverse
Name: 124025542
Synonym: NATL1_08351
Alternate gene names: NA
Gene position: 768603-767008 (Counterclockwise)
Preceding gene: 124025543
Following gene: 124025541
Centisome position: 41.22
GC content: 30.33
Gene sequence:
>1596_bases ATGATAGCGCCTTCACTGTTAGGCGAGTCATTGGCATTACAGCTAACATCTCAAGATGATAATTTAGAAATAATCCTAGA CAAAAAAGATATAAATGGGTTACCTAAACTTATTCTATTTTGCCTTGAAGAAGTAGAACTCTCAAACTCAATCAAACTAG AAATTCATAAGTTAAAAGAAAGATGGGAGCAATCTCCTGTCCTAATTGTAATACCAAAAAGTATTAAATTATCTTCTGAT GATTTGATGACTTTTGGTAGTGAAGGAGTTATTCAAGATCCTACTGTTGAACTTTTAAGAGATACAATCAATATTTTGAT TGGCGGCGGCAGAGTATTTAAAATTAATAATGAAACAAATTACAATGCTGACTCAATTCATAATTCATATGGCCTAGGAC ATTGGCTATTAACAAGTGGTTTATCACAAATAAATAAAGATCTATACACTATAGATCAAATAATAGCCAAGAAATCAACA AATACATTTTATCTTTTCATATTAATAGGTAGAAGAAGAGAACTATTAACAGCGAAGAGATTAATTATCTGGTTATGGGG GCCGCTAGAGGTATTAATAGAGTCTCCAATTAAAAGTAATAACAATAAAAATATAATCAACAAATACAATACCGACATAA CAATAAAAAATACCTCAACTAATGAATTATGGAATGTTATTTATAAACGGGTAAAGGAGAGACTTCAAGATGACCTTACA AATTCTACGGGCGAGCTAGCAGCTCTTTATTCATTAAATAAAAGCAAACGATATAATCTTTTAAAAACTCTTCTGAAAGA ATTTTCAACTATTATAATCAAACTTGATTCTAAAGATAATAGAGAAAAAGGATTAGAGGAGATTTTACAATCAATTACTC CTGAATTACGAGCTAATACATTGCGCAATTTCATAGATTCATATGATCGTTTAAAAAAGAATGGTGTTGACGTTTTTATT TCAGACTTTCTAGTACATAATGCAGATCTCGGAATACTTGATGATGAACTACCATCAATAGCATTAATAATAGATCCAAT ATTAAATAATAAGCCGCTTCTTATGGATGGAGACTATTTATCAATAGAAGACCCTCGATCTATTATTCAATTAGAAACAT TTATTCTAAATTGGATATTCAGGTCAGCTGAAATAGTTAGTGAAGAGATTATATCTTCATGTTCTGAATGGCCAGAATTA CGTAAATACTTTCTAAATAAAGAATTAGTTTCAACAAGGGAACTTGAACGCAAACGAAATCATATCAATACAAATAATCA ACTTCAAAATCTATTTAAAAAGCCGGTTAGATTATATGAAAGTAAAAGATTATATTATACAGTCAAAAACAATAACATTG AAAAAATTATCACTCTTGAACCTAGAGATGATGAATTAAAGAAACTAGACTGGCCCCAAAGGCAAATAGCATTTATAATA GAATTAAGAGATGCCTTGGCACCACAAGTACAGGCAATAATTCAATACTTAGGTGATTTAATAGTTCTAATCCTCACTAA AGTCGTGGGAAGATCTATAGGATTAATTGGTAGAGGTATCGCTCAAGGTATGGGAAGAAACTTATCCAAAGGATAA
Upstream 100 bases:
>100_bases ATTTTGGAAATAGGGCTGGAAGTATTTTTAAATCAAGTTATCTTAAAAAGGATAGGTTCTAGATTTAAAATTGATAAAAG AAAGAGCAAAACAAATTTTA
Downstream 100 bases:
>100_bases TTGAATTATTAATAACTATAGCTATATTTGCTTTAAGACTTTAGAATTTAGAAAATAGTACATACATTGATTTTGTTAAG AATATTTTCCTCACTGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MIAPSLLGESLALQLTSQDDNLEIILDKKDINGLPKLILFCLEEVELSNSIKLEIHKLKERWEQSPVLIVIPKSIKLSSD DLMTFGSEGVIQDPTVELLRDTINILIGGGRVFKINNETNYNADSIHNSYGLGHWLLTSGLSQINKDLYTIDQIIAKKST NTFYLFILIGRRRELLTAKRLIIWLWGPLEVLIESPIKSNNNKNIINKYNTDITIKNTSTNELWNVIYKRVKERLQDDLT NSTGELAALYSLNKSKRYNLLKTLLKEFSTIIIKLDSKDNREKGLEEILQSITPELRANTLRNFIDSYDRLKKNGVDVFI SDFLVHNADLGILDDELPSIALIIDPILNNKPLLMDGDYLSIEDPRSIIQLETFILNWIFRSAEIVSEEIISSCSEWPEL RKYFLNKELVSTRELERKRNHINTNNQLQNLFKKPVRLYESKRLYYTVKNNNIEKIITLEPRDDELKKLDWPQRQIAFII ELRDALAPQVQAIIQYLGDLIVLILTKVVGRSIGLIGRGIAQGMGRNLSKG
Sequences:
>Translated_531_residues MIAPSLLGESLALQLTSQDDNLEIILDKKDINGLPKLILFCLEEVELSNSIKLEIHKLKERWEQSPVLIVIPKSIKLSSD DLMTFGSEGVIQDPTVELLRDTINILIGGGRVFKINNETNYNADSIHNSYGLGHWLLTSGLSQINKDLYTIDQIIAKKST NTFYLFILIGRRRELLTAKRLIIWLWGPLEVLIESPIKSNNNKNIINKYNTDITIKNTSTNELWNVIYKRVKERLQDDLT NSTGELAALYSLNKSKRYNLLKTLLKEFSTIIIKLDSKDNREKGLEEILQSITPELRANTLRNFIDSYDRLKKNGVDVFI SDFLVHNADLGILDDELPSIALIIDPILNNKPLLMDGDYLSIEDPRSIIQLETFILNWIFRSAEIVSEEIISSCSEWPEL RKYFLNKELVSTRELERKRNHINTNNQLQNLFKKPVRLYESKRLYYTVKNNNIEKIITLEPRDDELKKLDWPQRQIAFII ELRDALAPQVQAIIQYLGDLIVLILTKVVGRSIGLIGRGIAQGMGRNLSKG >Mature_531_residues MIAPSLLGESLALQLTSQDDNLEIILDKKDINGLPKLILFCLEEVELSNSIKLEIHKLKERWEQSPVLIVIPKSIKLSSD DLMTFGSEGVIQDPTVELLRDTINILIGGGRVFKINNETNYNADSIHNSYGLGHWLLTSGLSQINKDLYTIDQIIAKKST NTFYLFILIGRRRELLTAKRLIIWLWGPLEVLIESPIKSNNNKNIINKYNTDITIKNTSTNELWNVIYKRVKERLQDDLT NSTGELAALYSLNKSKRYNLLKTLLKEFSTIIIKLDSKDNREKGLEEILQSITPELRANTLRNFIDSYDRLKKNGVDVFI SDFLVHNADLGILDDELPSIALIIDPILNNKPLLMDGDYLSIEDPRSIIQLETFILNWIFRSAEIVSEEIISSCSEWPEL RKYFLNKELVSTRELERKRNHINTNNQLQNLFKKPVRLYESKRLYYTVKNNNIEKIITLEPRDDELKKLDWPQRQIAFII ELRDALAPQVQAIIQYLGDLIVLILTKVVGRSIGLIGRGIAQGMGRNLSKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR016837 - InterPro: IPR022552 [H]
Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 60937; Mature: 60937
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPSLLGESLALQLTSQDDNLEIILDKKDINGLPKLILFCLEEVELSNSIKLEIHKLKE CCCHHHCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH RWEQSPVLIVIPKSIKLSSDDLMTFGSEGVIQDPTVELLRDTINILIGGGRVFKINNETN HHCCCCEEEEECCCCEECCCCHHCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCC YNADSIHNSYGLGHWLLTSGLSQINKDLYTIDQIIAKKSTNTFYLFILIGRRRELLTAKR CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHH LIIWLWGPLEVLIESPIKSNNNKNIINKYNTDITIKNTSTNELWNVIYKRVKERLQDDLT EEEEECCHHHHHHHCCCCCCCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHC NSTGELAALYSLNKSKRYNLLKTLLKEFSTIIIKLDSKDNREKGLEEILQSITPELRANT CCCCCEEHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCHHHHHHH LRNFIDSYDRLKKNGVDVFISDFLVHNADLGILDDELPSIALIIDPILNNKPLLMDGDYL HHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCCCEEECCCEE SIEDPRSIIQLETFILNWIFRSAEIVSEEIISSCSEWPELRKYFLNKELVSTRELERKRN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH HINTNNQLQNLFKKPVRLYESKRLYYTVKNNNIEKIITLEPRDDELKKLDWPQRQIAFII CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCHHHHCCCCHHHHHHHH ELRDALAPQVQAIIQYLGDLIVLILTKVVGRSIGLIGRGIAQGMGRNLSKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIAPSLLGESLALQLTSQDDNLEIILDKKDINGLPKLILFCLEEVELSNSIKLEIHKLKE CCCHHHCCCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH RWEQSPVLIVIPKSIKLSSDDLMTFGSEGVIQDPTVELLRDTINILIGGGRVFKINNETN HHCCCCEEEEECCCCEECCCCHHCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCC YNADSIHNSYGLGHWLLTSGLSQINKDLYTIDQIIAKKSTNTFYLFILIGRRRELLTAKR CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHH LIIWLWGPLEVLIESPIKSNNNKNIINKYNTDITIKNTSTNELWNVIYKRVKERLQDDLT EEEEECCHHHHHHHCCCCCCCCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHC NSTGELAALYSLNKSKRYNLLKTLLKEFSTIIIKLDSKDNREKGLEEILQSITPELRANT CCCCCEEHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCHHHHHHH LRNFIDSYDRLKKNGVDVFISDFLVHNADLGILDDELPSIALIIDPILNNKPLLMDGDYL HHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCEEEEEEHHCCCCCEEECCCEE SIEDPRSIIQLETFILNWIFRSAEIVSEEIISSCSEWPELRKYFLNKELVSTRELERKRN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH HINTNNQLQNLFKKPVRLYESKRLYYTVKNNNIEKIITLEPRDDELKKLDWPQRQIAFII CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCHHHHCCCCHHHHHHHH ELRDALAPQVQAIIQYLGDLIVLILTKVVGRSIGLIGRGIAQGMGRNLSKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]