| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is glgC [H]
Identifier: 124025514
GI number: 124025514
Start: 743772
End: 745067
Strand: Direct
Name: glgC [H]
Synonym: NATL1_08071
Alternate gene names: 124025514
Gene position: 743772-745067 (Clockwise)
Preceding gene: 124025513
Following gene: 124025515
Centisome position: 39.89
GC content: 38.12
Gene sequence:
>1296_bases ATGAAGAGAGTACTTGCCATCATTCTTGGCGGTGGAAAAGGATCACGCCTATATCCATTAACAAAAATGAGAGCAAAACC CGCTGTTCCATTAGCGGGTAAATATCGACTAATAGATATTCCAATAAGTAATTGCATAAATTCGGACATCAGTAAAATGT ATGTTCTTACGCAATTCAATAGTGCTTCTCTTAACAGGCATATTGCACAGACTTACAATCTGAGCGGACCTTTTGGCCAG GGTTTCGTTGAGGTTTTAGCTGCTCAGCAAACACCTGAAACCCCCTCTTGGTTTGAGGGTACTGCTGATGCGGTAAGAAA ATATCAATGGCTTTTTCAAGAGTGGGATGTTGATGAATATTTGATTCTCTCTGGAGATCAGCTTTATAGAATGGATTACA GCTTATTTGTTGAGCAGCATAGAAAAACAGGAGCTGATTTAACGGTTGCTGCTTTGCCAGTTGACTCAGCACAAGCGGAA GCATTTGGTTTAATGCGTACTGATGAAGCAGGCAATATTAAGGAATTTCGTGAAAAACCAACTGGTGACTCATTGAAAGC AATGGCAGTAGATACATCAAGGTTTGGATTGGAAGCAAATGAGGCAAAAGAAAAACCTTATTTGGCTTCTATGGGAATAT ATGTTTTTAGTCGTTCTACTCTTTTTGACTTATTAAATAAATTTCCTTCTTACACAGATTTTGGAAAAGAAATTATTCCT GAGGCTTTAGGTAGAGGTGACAAGCTTAAAAGTTATGTTTTTAATGACTATTGGGAGGATATTGGAACTATTGGTGCATT CTTTGAATCAAATTTAGCCTTAACTCAGCAACCTACCCCTCCGTTTAGTTTTTATGATGAGAAGTTCCCTATTTATACTA GGCCTAGATATTTGCCACCTTCTAAAATTGTAGATACACAAATAACTGATTCAATAGTGTCCGAGGGATCAATACTTAAA TCATGTAGTATTCATCATTGTGTGTTGGGAGTTAGGAGTCGGATTGAAAGTGACGTTGTTCTAAATGAAACCCTTGTTAT GGGATCTGATTTTTACGAATCTTATGAAGAGAGAATAGCGCTAAGAAATGGGGGTGGTATTCCCTTGGGAGTGGGACAAG GCACAACTGTTAAAAGAGCTATTCTCGATAAAAATGCTCGCATTGGTGACAACGTGACGATAGTCAATAAAGACAATGTG GAAGAAGCTGATCGAGCAGATCAAGGCTTTTATATCCGTAATGGAATAGTTGTTATCGTCAAAAACGCCACAATTCCAGA TGGAACTATTATTTGA
Upstream 100 bases:
>100_bases TTATTTACTTTTGTAATTCTTACTACTTATCACTTTTTACTGGATTAATGAGCACTCTATCCAGTAGGTTTGCTCCGAAT AGCCGATTAATAGTGCCTTC
Downstream 100 bases:
>100_bases TTTCCGTTTGATGTCTTAGCAATTTAATAAGCCTAGTTTTTTAAGATTTTATTATTAAATATTTTTCAAAGAATTGTTCA TTCCTGACATTGAGCTATTT
Product: glucose-1-phosphate adenylyltransferase
Products: NA
Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKRVLAIILGGGKGSRLYPLTKMRAKPAVPLAGKYRLIDIPISNCINSDISKMYVLTQFNSASLNRHIAQTYNLSGPFGQ GFVEVLAAQQTPETPSWFEGTADAVRKYQWLFQEWDVDEYLILSGDQLYRMDYSLFVEQHRKTGADLTVAALPVDSAQAE AFGLMRTDEAGNIKEFREKPTGDSLKAMAVDTSRFGLEANEAKEKPYLASMGIYVFSRSTLFDLLNKFPSYTDFGKEIIP EALGRGDKLKSYVFNDYWEDIGTIGAFFESNLALTQQPTPPFSFYDEKFPIYTRPRYLPPSKIVDTQITDSIVSEGSILK SCSIHHCVLGVRSRIESDVVLNETLVMGSDFYESYEERIALRNGGGIPLGVGQGTTVKRAILDKNARIGDNVTIVNKDNV EEADRADQGFYIRNGIVVIVKNATIPDGTII
Sequences:
>Translated_431_residues MKRVLAIILGGGKGSRLYPLTKMRAKPAVPLAGKYRLIDIPISNCINSDISKMYVLTQFNSASLNRHIAQTYNLSGPFGQ GFVEVLAAQQTPETPSWFEGTADAVRKYQWLFQEWDVDEYLILSGDQLYRMDYSLFVEQHRKTGADLTVAALPVDSAQAE AFGLMRTDEAGNIKEFREKPTGDSLKAMAVDTSRFGLEANEAKEKPYLASMGIYVFSRSTLFDLLNKFPSYTDFGKEIIP EALGRGDKLKSYVFNDYWEDIGTIGAFFESNLALTQQPTPPFSFYDEKFPIYTRPRYLPPSKIVDTQITDSIVSEGSILK SCSIHHCVLGVRSRIESDVVLNETLVMGSDFYESYEERIALRNGGGIPLGVGQGTTVKRAILDKNARIGDNVTIVNKDNV EEADRADQGFYIRNGIVVIVKNATIPDGTII >Mature_431_residues MKRVLAIILGGGKGSRLYPLTKMRAKPAVPLAGKYRLIDIPISNCINSDISKMYVLTQFNSASLNRHIAQTYNLSGPFGQ GFVEVLAAQQTPETPSWFEGTADAVRKYQWLFQEWDVDEYLILSGDQLYRMDYSLFVEQHRKTGADLTVAALPVDSAQAE AFGLMRTDEAGNIKEFREKPTGDSLKAMAVDTSRFGLEANEAKEKPYLASMGIYVFSRSTLFDLLNKFPSYTDFGKEIIP EALGRGDKLKSYVFNDYWEDIGTIGAFFESNLALTQQPTPPFSFYDEKFPIYTRPRYLPPSKIVDTQITDSIVSEGSILK SCSIHHCVLGVRSRIESDVVLNETLVMGSDFYESYEERIALRNGGGIPLGVGQGTTVKRAILDKNARIGDNVTIVNKDNV EEADRADQGFYIRNGIVVIVKNATIPDGTII
Specific function: Glycogen biosynthesis; first step. [C]
COG id: COG0448
COG function: function code G; ADP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789837, Length=437, Percent_Identity=33.4096109839817, Blast_Score=216, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005836 - InterPro: IPR011831 - InterPro: IPR023049 - InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.27 [H]
Molecular weight: Translated: 47992; Mature: 47992
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVLAIILGGGKGSRLYPLTKMRAKPAVPLAGKYRLIDIPISNCINSDISKMYVLTQFN CCEEEEEEEECCCCCEEECHHHHCCCCCCCCCCCEEEEEECHHHHCCCCCCEEEEEEECC SASLNRHIAQTYNLSGPFGQGFVEVLAAQQTPETPSWFEGTADAVRKYQWLFQEWDVDEY CHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE LILSGDQLYRMDYSLFVEQHRKTGADLTVAALPVDSAQAEAFGLMRTDEAGNIKEFREKP EEECCCEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCEEECCCCCCHHHHHCCC TGDSLKAMAVDTSRFGLEANEAKEKPYLASMGIYVFSRSTLFDLLNKFPSYTDFGKEIIP CCCCEEEEEEECHHCCCCCCHHCCCCCEEECCEEEEEHHHHHHHHHHCCCHHHHHHHHHH EALGRGDKLKSYVFNDYWEDIGTIGAFFESNLALTQQPTPPFSFYDEKFPIYTRPRYLPP HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEECCCCCCC SKIVDTQITDSIVSEGSILKSCSIHHCVLGVRSRIESDVVLNETLVMGSDFYESYEERIA HHHHCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHEE LRNGGGIPLGVGQGTTVKRAILDKNARIGDNVTIVNKDNVEEADRADQGFYIRNGIVVIV EECCCCCEEECCCCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHCCCCCEEEECCEEEEE KNATIPDGTII ECCCCCCCCCC >Mature Secondary Structure MKRVLAIILGGGKGSRLYPLTKMRAKPAVPLAGKYRLIDIPISNCINSDISKMYVLTQFN CCEEEEEEEECCCCCEEECHHHHCCCCCCCCCCCEEEEEECHHHHCCCCCCEEEEEEECC SASLNRHIAQTYNLSGPFGQGFVEVLAAQQTPETPSWFEGTADAVRKYQWLFQEWDVDEY CHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE LILSGDQLYRMDYSLFVEQHRKTGADLTVAALPVDSAQAEAFGLMRTDEAGNIKEFREKP EEECCCEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCEEECCCCCCHHHHHCCC TGDSLKAMAVDTSRFGLEANEAKEKPYLASMGIYVFSRSTLFDLLNKFPSYTDFGKEIIP CCCCEEEEEEECHHCCCCCCHHCCCCCEEECCEEEEEHHHHHHHHHHCCCHHHHHHHHHH EALGRGDKLKSYVFNDYWEDIGTIGAFFESNLALTQQPTPPFSFYDEKFPIYTRPRYLPP HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEECCCCCCC SKIVDTQITDSIVSEGSILKSCSIHHCVLGVRSRIESDVVLNETLVMGSDFYESYEERIA HHHHCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHEE LRNGGGIPLGVGQGTTVKRAILDKNARIGDNVTIVNKDNVEEADRADQGFYIRNGIVVIV EECCCCCEEECCCCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHCCCCCEEEECCEEEEE KNATIPDGTII ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA