Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is hslO
Identifier: 124025429
GI number: 124025429
Start: 666311
End: 667210
Strand: Reverse
Name: hslO
Synonym: NATL1_07221
Alternate gene names: 124025429
Gene position: 667210-666311 (Counterclockwise)
Preceding gene: 124025430
Following gene: 124025425
Centisome position: 35.78
GC content: 36.89
Gene sequence:
>900_bases ATGACAGATTCACTAGTTAGAGCGACTGCTGCAAAAGGGGGGATCAGACTAGTCGCCGTATCAACGACTGAATCTACAAA AGAAGCAAAAGAAAGACATTCTCTTTCCTATTTAACTTCTGCAATTGTAGGTAGGGCAATGAGTGCAAGCCTTTTGCTAG CAAGCTCAATGAAGGTAAATCATGGAAGGGTGACTTTGAGGATAAGCTCAAATGGACCACTAAAAGGATTAACTATTGAT GCGGGTAGAGATGGAAGTGTGAGAGGCTACGTTGGCGATCCAAGTCTTGAATTAGACCTAATTAAGAATAAAAGCAACCA CTATACATTTGATTTCAAAAAAGCTACAGGTATTGGCTATCTTCACGTTATTAGAGATGACGGAAAAGGTGAACCACACA ACAGCACAGTCGAATTAATTAATGGAGGGATAGGTGAAGACATAGCTTCCTATTTATTACATTCCGAACAAACGCCCTCT GCTGTGTTTGTTGGAGAAAGAATCAATCAAGATGGGATAGTTTGTAGCGGAGGACTTTTAGCACAAATACTACCTAAAGC AGAACGAGATTATTCATTGATAGACTTACTTGAAGATCGATGTAAAGAGATTAACTCTTTTAGTGAGTTATTAAACAAAA AAGGGAATAACCTTATTTCTCTTATTGAAGAGATTTTCCCAGATCTTGATCAATCACCTTCAGATATTATTAGCACATCT CAGGAAGTTCGTTTTAAATGTAGATGTTCAAGAGAAAGAAGCCTATCAGCGTTAAAGATTTTGGGGAAAGATGAACTTCA GAAAATGATAAAGGAAGATGGGAAAGCAGAACTAACATGTCAATTCTGTAAAAATGTTTATCTTGTTAAAGAGGACGAAT TGATATCTTTAATCGATTAA
Upstream 100 bases:
>100_bases ATAGTTACCCATGAACCCGAACTTTTTAAAAATTTGAATACCGACAATTACAAGTTGCACAATGGTCAACTTATCCCTCA ATAAACAATTCAACTAATCA
Downstream 100 bases:
>100_bases AGGATTAATCAAGGAAAACCACTCCTAACCAAAGCAAAAATACTGCAGGTATCGCCTCAAATTTGTCTGAAGATAATGAT CCAGCGTTATCAATAAATGA
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTDSLVRATAAKGGIRLVAVSTTESTKEAKERHSLSYLTSAIVGRAMSASLLLASSMKVNHGRVTLRISSNGPLKGLTID AGRDGSVRGYVGDPSLELDLIKNKSNHYTFDFKKATGIGYLHVIRDDGKGEPHNSTVELINGGIGEDIASYLLHSEQTPS AVFVGERINQDGIVCSGGLLAQILPKAERDYSLIDLLEDRCKEINSFSELLNKKGNNLISLIEEIFPDLDQSPSDIISTS QEVRFKCRCSRERSLSALKILGKDELQKMIKEDGKAELTCQFCKNVYLVKEDELISLID
Sequences:
>Translated_299_residues MTDSLVRATAAKGGIRLVAVSTTESTKEAKERHSLSYLTSAIVGRAMSASLLLASSMKVNHGRVTLRISSNGPLKGLTID AGRDGSVRGYVGDPSLELDLIKNKSNHYTFDFKKATGIGYLHVIRDDGKGEPHNSTVELINGGIGEDIASYLLHSEQTPS AVFVGERINQDGIVCSGGLLAQILPKAERDYSLIDLLEDRCKEINSFSELLNKKGNNLISLIEEIFPDLDQSPSDIISTS QEVRFKCRCSRERSLSALKILGKDELQKMIKEDGKAELTCQFCKNVYLVKEDELISLID >Mature_298_residues TDSLVRATAAKGGIRLVAVSTTESTKEAKERHSLSYLTSAIVGRAMSASLLLASSMKVNHGRVTLRISSNGPLKGLTIDA GRDGSVRGYVGDPSLELDLIKNKSNHYTFDFKKATGIGYLHVIRDDGKGEPHNSTVELINGGIGEDIASYLLHSEQTPSA VFVGERINQDGIVCSGGLLAQILPKAERDYSLIDLLEDRCKEINSFSELLNKKGNNLISLIEEIFPDLDQSPSDIISTSQ EVRFKCRCSRERSLSALKILGKDELQKMIKEDGKAELTCQFCKNVYLVKEDELISLID
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=286, Percent_Identity=25.8741258741259, Blast_Score=103, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_PROM1 (A2C1C0)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014545.1 - ProteinModelPortal: A2C1C0 - SMR: A2C1C0 - STRING: A2C1C0 - GeneID: 4780038 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_07221 - eggNOG: COG1281 - HOGENOM: HBG286231 - OMA: VMLGRAM - ProtClustDB: PRK00114 - BioCyc: PMAR167555:NATL1_07221-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 32720; Mature: 32588
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSLVRATAAKGGIRLVAVSTTESTKEAKERHSLSYLTSAIVGRAMSASLLLASSMKVN CCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEC HGRVTLRISSNGPLKGLTIDAGRDGSVRGYVGDPSLELDLIKNKSNHYTFDFKKATGIGY CCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEE LHVIRDDGKGEPHNSTVELINGGIGEDIASYLLHSEQTPSAVFVGERINQDGIVCSGGLL EEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCHH AQILPKAERDYSLIDLLEDRCKEINSFSELLNKKGNNLISLIEEIFPDLDQSPSDIISTS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCC QEVRFKCRCSRERSLSALKILGKDELQKMIKEDGKAELTCQFCKNVYLVKEDELISLID HHHEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEHHHCCEEEEECCCCCCCCC >Mature Secondary Structure TDSLVRATAAKGGIRLVAVSTTESTKEAKERHSLSYLTSAIVGRAMSASLLLASSMKVN CCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEC HGRVTLRISSNGPLKGLTIDAGRDGSVRGYVGDPSLELDLIKNKSNHYTFDFKKATGIGY CCEEEEEECCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEE LHVIRDDGKGEPHNSTVELINGGIGEDIASYLLHSEQTPSAVFVGERINQDGIVCSGGLL EEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCHH AQILPKAERDYSLIDLLEDRCKEINSFSELLNKKGNNLISLIEEIFPDLDQSPSDIISTS HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCC QEVRFKCRCSRERSLSALKILGKDELQKMIKEDGKAELTCQFCKNVYLVKEDELISLID HHHEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEHHHCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA