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The map label for this gene is amiC [H]

Identifier: 124025383

GI number: 124025383

Start: 620781

End: 621845

Strand: Direct

Name: amiC [H]

Synonym: NATL1_06741

Alternate gene names: 124025383

Gene position: 620781-621845 (Clockwise)

Preceding gene: 124025382

Following gene: 124025384

Centisome position: 33.29

GC content: 34.74

Gene sequence:

>1065_bases
ATGTCAAAACTAGGATTGTTTGCGGGATTTATTTTTTGTTCCAATCTCTTTATTTCTTTACCTCTAAAATCTGCTAGTGC
TCTTGCCGCTTGGGCCCTAACTAGTAACGGTAGCCTTAAATTACGAACTTCCTCTGGGGCTAAATTAGATGCTTTTTATC
AATCTTCAACTACTGATAAGGGTGATAGGGTTTGGATCGATTTCACTGGAGAATTAAGCCGCCCTAGGACTATTAAAGGT
AATGGATCAGTTAAGGAAATCAGGCTAGGAAAACCCTCTAAGGGTAAAACAAGGCTTGTTATTGAATTTCTGCCATCAGT
AGAATTAGAACCATCAAAATTACAATTAATTGGTATATCAACAAATACCTGGGAGTTGGAACTTATTGGTCTAGAAAGTA
ATTCTTTTCGTCCGATTGAAGAAGGTAATATCCTAAGAAACTCAATAAAAAGAACTTATGAAAAAATAAAGCCTCAAGAT
TTAGATATTTCTTCTTTACCAGATGTACCCTATGGAAAGTATAAAGTTGTTATCGATCCAGGGCATGGTGGCTCAGACCC
TGGTGCTGTTGGAATTAATGGATTAAGAGAGACTGATATTGTTTTAGAAGTGTCAAAGAGTGTTTCAGATTTTCTAACAA
ATAAAGGAGTTAAAACTATTTTAACTCGGAATCATGAGAGAACATTAGACTTACAGCCAAGAGTTGCCAAGGCTAATAAT
TCAAAAGCAGATATTTTTGTTAGTATTCATGCAAATGCAACGCGAGGAAAGAGAAAAGAAGTTAATGGCTTAGAGACATA
TTATTACTCTGGTTATAAAGGATATTCTTTAGCTAAAAATATACAAAAACAAATTTTGATTGTTTCTCCGCAAAGTCCTG
ATAGGGGTGTTCGTAGATCACGCTTTTATGTGATAAGAAAAACATCAATGCCTGCAGCTTTAGTAGAAATTGGATTTGTT
ACTGGTACGTATGACGCCGATTTGTTACGACAAAAAGTTTATAGGGATAAAATGTCTTTTGCTATTGCTAGGGGAATACT
TAACTATCTAAAAATTTCAAAATAG

Upstream 100 bases:

>100_bases
CTGCTGATAAAGAAAGAGTGGAGAGAATTAGAGGACAAATGCCCAGCCTGAAACATCGAAAAACAGAGCTTTTTATTTGA
TGTTTAAAGGTCAATCTTTA

Downstream 100 bases:

>100_bases
ATATGCGTATTGGATTATTTGATAGTGGTATTGGAGGCTTCACTGTTCTAAAAAAGGTTATTGAGTTATGTCCCAATAAT
TCATTTATATATTTAGCTGA

Product: cell wall hydrolase/autolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSKLGLFAGFIFCSNLFISLPLKSASALAAWALTSNGSLKLRTSSGAKLDAFYQSSTTDKGDRVWIDFTGELSRPRTIKG
NGSVKEIRLGKPSKGKTRLVIEFLPSVELEPSKLQLIGISTNTWELELIGLESNSFRPIEEGNILRNSIKRTYEKIKPQD
LDISSLPDVPYGKYKVVIDPGHGGSDPGAVGINGLRETDIVLEVSKSVSDFLTNKGVKTILTRNHERTLDLQPRVAKANN
SKADIFVSIHANATRGKRKEVNGLETYYYSGYKGYSLAKNIQKQILIVSPQSPDRGVRRSRFYVIRKTSMPAALVEIGFV
TGTYDADLLRQKVYRDKMSFAIARGILNYLKISK

Sequences:

>Translated_354_residues
MSKLGLFAGFIFCSNLFISLPLKSASALAAWALTSNGSLKLRTSSGAKLDAFYQSSTTDKGDRVWIDFTGELSRPRTIKG
NGSVKEIRLGKPSKGKTRLVIEFLPSVELEPSKLQLIGISTNTWELELIGLESNSFRPIEEGNILRNSIKRTYEKIKPQD
LDISSLPDVPYGKYKVVIDPGHGGSDPGAVGINGLRETDIVLEVSKSVSDFLTNKGVKTILTRNHERTLDLQPRVAKANN
SKADIFVSIHANATRGKRKEVNGLETYYYSGYKGYSLAKNIQKQILIVSPQSPDRGVRRSRFYVIRKTSMPAALVEIGFV
TGTYDADLLRQKVYRDKMSFAIARGILNYLKISK
>Mature_353_residues
SKLGLFAGFIFCSNLFISLPLKSASALAAWALTSNGSLKLRTSSGAKLDAFYQSSTTDKGDRVWIDFTGELSRPRTIKGN
GSVKEIRLGKPSKGKTRLVIEFLPSVELEPSKLQLIGISTNTWELELIGLESNSFRPIEEGNILRNSIKRTYEKIKPQDL
DISSLPDVPYGKYKVVIDPGHGGSDPGAVGINGLRETDIVLEVSKSVSDFLTNKGVKTILTRNHERTLDLQPRVAKANNS
KADIFVSIHANATRGKRKEVNGLETYYYSGYKGYSLAKNIQKQILIVSPQSPDRGVRRSRFYVIRKTSMPAALVEIGFVT
GTYDADLLRQKVYRDKMSFAIARGILNYLKISK

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788776, Length=223, Percent_Identity=30.4932735426009, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082163, Length=219, Percent_Identity=28.310502283105, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3 [H]

EC number: 3.5.1.28

Molecular weight: Translated: 39215; Mature: 39083

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLGLFAGFIFCSNLFISLPLKSASALAAWALTSNGSLKLRTSSGAKLDAFYQSSTTDK
CCCHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCCC
GDRVWIDFTGELSRPRTIKGNGSVKEIRLGKPSKGKTRLVIEFLPSVELEPSKLQLIGIS
CCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEC
TNTWELELIGLESNSFRPIEEGNILRNSIKRTYEKIKPQDLDISSLPDVPYGKYKVVIDP
CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC
GHGGSDPGAVGINGLRETDIVLEVSKSVSDFLTNKGVKTILTRNHERTLDLQPRVAKANN
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCCEECCCCCEECCCC
SKADIFVSIHANATRGKRKEVNGLETYYYSGYKGYSLAKNIQKQILIVSPQSPDRGVRRS
CCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCC
RFYVIRKTSMPAALVEIGFVTGTYDADLLRQKVYRDKMSFAIARGILNYLKISK
EEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKLGLFAGFIFCSNLFISLPLKSASALAAWALTSNGSLKLRTSSGAKLDAFYQSSTTDK
CCHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCCC
GDRVWIDFTGELSRPRTIKGNGSVKEIRLGKPSKGKTRLVIEFLPSVELEPSKLQLIGIS
CCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEC
TNTWELELIGLESNSFRPIEEGNILRNSIKRTYEKIKPQDLDISSLPDVPYGKYKVVIDP
CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC
GHGGSDPGAVGINGLRETDIVLEVSKSVSDFLTNKGVKTILTRNHERTLDLQPRVAKANN
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCCEECCCCCEECCCC
SKADIFVSIHANATRGKRKEVNGLETYYYSGYKGYSLAKNIQKQILIVSPQSPDRGVRRS
CCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCC
RFYVIRKTSMPAALVEIGFVTGTYDADLLRQKVYRDKMSFAIARGILNYLKISK
EEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]