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The map label for this gene is 124025271

Identifier: 124025271

GI number: 124025271

Start: 507692

End: 508129

Strand: Reverse

Name: 124025271

Synonym: NATL1_05601

Alternate gene names: NA

Gene position: 508129-507692 (Counterclockwise)

Preceding gene: 124025274

Following gene: 124025269

Centisome position: 27.25

GC content: 39.73

Gene sequence:

>438_bases
ATGAACCATTGCATGCTTGAGGTTTTGGTAAAGAAGGCCCCAACAGTTCGTTTTACCCAAGACAACAAAACTCCGCTAGC
TGAAATAGAAGTTGAATTTGACAGCCTCCGTGCTGATGACCCTCCCTGCTCAATTAAGGTAGTTGGTTGGGGAAAATTAG
CAGAAGAACTTCAAAATACAGTTCAAGTCAATTCTAAATTAGTAATTGAAGGTCGCTTAAGAATGAATACGGTTCCTCGC
CAGGATGGGACTAAAGAGAAACAAGCTGAATTTACTCTTTCTAGAATCCACCCCTTTTCCTCTAAAACAGCTCTTTCATC
AATACCTTCTCAAACTCAGTCAAATATAAAAAGCGATTCAGCTAATCCCTTAAATAACGAGGGTGTTAAATGGGACAGTT
CACCATTAGTACCTGATACAGATGACATTCCATTCTGA

Upstream 100 bases:

>100_bases
AAGACATGGCCTTCGCCTGTTCCTGTTAACAACCAAAGATGTGGCTGGCATTTTTCCCTTATATCCATCAAGATAAAACA
CAATAACTAAAGAAAAAAAA

Downstream 100 bases:

>100_bases
AAAAATCAACCATTTTCTTCAATGTATTCTGCAGCCCTAGTTAAAAGTTGACCTAATTCTCTCTCCAAAGCTGCCAGATC
AGGTCTAAATTCAGGCCAGC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: Thylakoid-associated SSB [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNHCMLEVLVKKAPTVRFTQDNKTPLAEIEVEFDSLRADDPPCSIKVVGWGKLAEELQNTVQVNSKLVIEGRLRMNTVPR
QDGTKEKQAEFTLSRIHPFSSKTALSSIPSQTQSNIKSDSANPLNNEGVKWDSSPLVPDTDDIPF

Sequences:

>Translated_145_residues
MNHCMLEVLVKKAPTVRFTQDNKTPLAEIEVEFDSLRADDPPCSIKVVGWGKLAEELQNTVQVNSKLVIEGRLRMNTVPR
QDGTKEKQAEFTLSRIHPFSSKTALSSIPSQTQSNIKSDSANPLNNEGVKWDSSPLVPDTDDIPF
>Mature_145_residues
MNHCMLEVLVKKAPTVRFTQDNKTPLAEIEVEFDSLRADDPPCSIKVVGWGKLAEELQNTVQVNSKLVIEGRLRMNTVPR
QDGTKEKQAEFTLSRIHPFSSKTALSSIPSQTQSNIKSDSANPLNNEGVKWDSSPLVPDTDDIPF

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 16134; Mature: 16134

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHCMLEVLVKKAPTVRFTQDNKTPLAEIEVEFDSLRADDPPCSIKVVGWGKLAEELQNT
CCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEHHCCCCCCCCCEEEEEECHHHHHHHHHH
VQVNSKLVIEGRLRMNTVPRQDGTKEKQAEFTLSRIHPFSSKTALSSIPSQTQSNIKSDS
HHCCCEEEEECCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCCCCC
ANPLNNEGVKWDSSPLVPDTDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNHCMLEVLVKKAPTVRFTQDNKTPLAEIEVEFDSLRADDPPCSIKVVGWGKLAEELQNT
CCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEHHCCCCCCCCCEEEEEECHHHHHHHHHH
VQVNSKLVIEGRLRMNTVPRQDGTKEKQAEFTLSRIHPFSSKTALSSIPSQTQSNIKSDS
HHCCCEEEEECCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCCCCC
ANPLNNEGVKWDSSPLVPDTDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]