| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025269
Identifier: 124025269
GI number: 124025269
Start: 506877
End: 507440
Strand: Reverse
Name: 124025269
Synonym: NATL1_05581
Alternate gene names: NA
Gene position: 507440-506877 (Counterclockwise)
Preceding gene: 124025271
Following gene: 124025268
Centisome position: 27.21
GC content: 39.36
Gene sequence:
>564_bases ATGAATAAACTTCTGTCACCGGCAAGCCTCATCACTATAGGAGGAGCATCCCTTTCTCTAATAGGCTTAACAGCCTATTT CACTGATGCAACAAACCTCAGTGTTCCGACTTTCTTCTATGGAGTACCTATTTTTCTAATAGGTATATCACTGAAAACGA CTGAAGTTCCTCCTGCCCTAAGAGTAGTTCCGGCAACTAAGTTTGCCTCAGAAAGAGACAGAGCTCCTGAAGAGCTAGGA AAACTAGTTAAAGATGTGACTAGATGGCGCTATGGCCAATCTTGCCAACTTGAAGCATCTCTAAGAGTATTAAAACTTTG GGACATAGACAATCCTCCCCAACTTATAGAAGTAGAAGAGTTGGTTAAAGAGGGTAATTATGGAATACGAATGAGATTTG AAATGGCTGCTGTGTCCTTAGAAAGATGGAATGCTCAAAAAGAACGTTTAGGAAGATTCTTTGCTAAAGGTTTGTGCGCT GAATTATTTTGTCCTACACCAGGTGCAATAGATTTAATACTACTTCCGCAAAAACAAGAAGATAATCCACAAGAAAATGA ATAA
Upstream 100 bases:
>100_bases CAACAAGTTCATTTAACTCAGAAAATTGTTTTTGGTGTGAGGCCATGAGACTGTCTCCTGAAAAACCCATCTGCCCACGA TTTTAGCCAAAATTACATTC
Downstream 100 bases:
>100_bases AGAAATCCAACAAGCTAACCACAGTAAGAATATTAATAAACCCTTCACAGACAAAGATTCAATAAGGGTTTCTGTCTTAA GTGAGGCACTTCCTTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNKLLSPASLITIGGASLSLIGLTAYFTDATNLSVPTFFYGVPIFLIGISLKTTEVPPALRVVPATKFASERDRAPEELG KLVKDVTRWRYGQSCQLEASLRVLKLWDIDNPPQLIEVEELVKEGNYGIRMRFEMAAVSLERWNAQKERLGRFFAKGLCA ELFCPTPGAIDLILLPQKQEDNPQENE
Sequences:
>Translated_187_residues MNKLLSPASLITIGGASLSLIGLTAYFTDATNLSVPTFFYGVPIFLIGISLKTTEVPPALRVVPATKFASERDRAPEELG KLVKDVTRWRYGQSCQLEASLRVLKLWDIDNPPQLIEVEELVKEGNYGIRMRFEMAAVSLERWNAQKERLGRFFAKGLCA ELFCPTPGAIDLILLPQKQEDNPQENE >Mature_187_residues MNKLLSPASLITIGGASLSLIGLTAYFTDATNLSVPTFFYGVPIFLIGISLKTTEVPPALRVVPATKFASERDRAPEELG KLVKDVTRWRYGQSCQLEASLRVLKLWDIDNPPQLIEVEELVKEGNYGIRMRFEMAAVSLERWNAQKERLGRFFAKGLCA ELFCPTPGAIDLILLPQKQEDNPQENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021275 [H]
Pfam domain/function: PF11016 DUF2854 [H]
EC number: NA
Molecular weight: Translated: 20883; Mature: 20883
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLSPASLITIGGASLSLIGLTAYFTDATNLSVPTFFYGVPIFLIGISLKTTEVPPAL CCCCCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCHHHHHCEEHHEEECEECCCCCCCE RVVPATKFASERDRAPEELGKLVKDVTRWRYGQSCQLEASLRVLKLWDIDNPPQLIEVEE EEEECHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCCCEEEHHH LVKEGNYGIRMRFEMAAVSLERWNAQKERLGRFFAKGLCAELFCPTPGAIDLILLPQKQE HHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC DNPQENE CCCCCCC >Mature Secondary Structure MNKLLSPASLITIGGASLSLIGLTAYFTDATNLSVPTFFYGVPIFLIGISLKTTEVPPAL CCCCCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCHHHHHCEEHHEEECEECCCCCCCE RVVPATKFASERDRAPEELGKLVKDVTRWRYGQSCQLEASLRVLKLWDIDNPPQLIEVEE EEEECHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCEEEEEEECCCCCCCEEEHHH LVKEGNYGIRMRFEMAAVSLERWNAQKERLGRFFAKGLCAELFCPTPGAIDLILLPQKQE HHHCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC DNPQENE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]