Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124025254

Identifier: 124025254

GI number: 124025254

Start: 491005

End: 491652

Strand: Direct

Name: 124025254

Synonym: NATL1_05431

Alternate gene names: NA

Gene position: 491005-491652 (Clockwise)

Preceding gene: 124025253

Following gene: 124025255

Centisome position: 26.33

GC content: 32.87

Gene sequence:

>648_bases
ATGCAGAACCATCCAATCCCCTCGGTCACTGATCCATTGCAATACCGAGCAATTGGATTAGTTAGAGGTATTTACAAGCC
TCAAGATGATGACACCTTTACTCGTGGAGCTCTAATTGATTCAAAAGGCAATGAAATAGATTCAGTTGTCCTTGGAAGAG
TCATAACCTTGATTAGAAATCACGTCCCTCTAGAAAAACCTCACCTCTGGGTCGTATATCCAAGATGTAGGAATAATCAA
AATCTTCATTTGCAAATCACAGGTATTTGGGAACCAAGTACTTTAAAAAAAGATCTTCTTGATAGCGAGGGATTGAATGA
AAATTCAGGTTTTAAGGGGGATTCTGATTCTTTATTGGAAGGTGATGATTATTTTTCAATAAGAGGAGAATTAATTTTTA
CTAAGCCAGAGGAAAAGGATGTAGTTATTAAAATTCGTCAAAAGCCAAGAAGTCAGCAAAAAAAAGCTTTACCTTTCAAA
TTGAATCTTAAAGGTGAAGTACCTATTAATTATTTAAAACATTTTATTAGTCTAAATGTTCGTCGTGTTGACTATCAACT
TTTGATTGAGGATTTTCAAATAATAGGCCCTCTTTCTAAACAACAAATAAACAATAAAAGTAAAAAAATCTTAAAAAATA
AAAATTAG

Upstream 100 bases:

>100_bases
GTCAGATGATGAGAATATCCCAAATGAATAAAAACACAATAGTATCCTTAGGCTTTTGGTAAATTTAAAATTGGTCCCTA
ATGGCCTCTTAGTTAAATAG

Downstream 100 bases:

>100_bases
TCTTATTTCGAGAATTATATATAAATGCATTCCATCTATAAAACTAATTATATATTTACTAGTAAATGAAATCTATTTTT
ATTGATTGTAGTCTTGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRNHVPLEKPHLWVVYPRCRNNQ
NLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLEGDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFK
LNLKGEVPINYLKHFISLNVRRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN

Sequences:

>Translated_215_residues
MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRNHVPLEKPHLWVVYPRCRNNQ
NLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLEGDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFK
LNLKGEVPINYLKHFISLNVRRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN
>Mature_215_residues
MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRNHVPLEKPHLWVVYPRCRNNQ
NLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLEGDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFK
LNLKGEVPINYLKHFISLNVRRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24720; Mature: 24720

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRN
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHH
HVPLEKPHLWVVYPRCRNNQNLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLE
CCCCCCCCEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFKLNLKGEVPINYLKHFISLNV
CCCEEEEECEEEEECCCCCCEEEEEECCCCCHHHHCCCEEEECCCCCCHHHHHHHHHCCC
RRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN
EEHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCC
>Mature Secondary Structure
MQNHPIPSVTDPLQYRAIGLVRGIYKPQDDDTFTRGALIDSKGNEIDSVVLGRVITLIRN
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHH
HVPLEKPHLWVVYPRCRNNQNLHLQITGIWEPSTLKKDLLDSEGLNENSGFKGDSDSLLE
CCCCCCCCEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GDDYFSIRGELIFTKPEEKDVVIKIRQKPRSQQKKALPFKLNLKGEVPINYLKHFISLNV
CCCEEEEECEEEEECCCCCCEEEEEECCCCCHHHHCCCEEEECCCCCCHHHHHHHHHCCC
RRVDYQLLIEDFQIIGPLSKQQINNKSKKILKNKN
EEHHHHHHHHHHHHHCCCHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA