Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is lgt
Identifier: 124025226
GI number: 124025226
Start: 469524
End: 470435
Strand: Reverse
Name: lgt
Synonym: NATL1_05151
Alternate gene names: 124025226
Gene position: 470435-469524 (Counterclockwise)
Preceding gene: 124025227
Following gene: 124025225
Centisome position: 25.23
GC content: 35.2
Gene sequence:
>912_bases ATGGAACATATTTTTTTAGAGCTTAGATCACCTGGGCCTGATTTGTTTCAACTGGGCCCTTTTTCTTTAAGGTGGTATGG ATTGCTAATAGCTATTTCAGTTTTAGTAGGTCTAAATTTATCAAGTGAGTTGGCCTCAAAAAAAGGATTAAAAAAAAGCC TTATTAACGATTTACTTCCTATTTTAGTTTTGGCATCTGTAATTGGTGCAAGAATTTATTATGTTGCATTTGAATGGAGA AATTACACTGGAAAAAACTTCTGGAGTTCAATTAATTTCCTGAACTTAAATATTCCTCTTCCCAGTGCCCTAGAAATCTG GGGAGGAGGAATTGCAATTCATGGGGCACTGATAATGGGTACATTGTCCATTATATTTTTTTGCCGCTGGAGAAAAGAAC CTTTTTGGGATGTTATTGATGTTTTGGTCCCCTCAGTTGCATTAGGCCAAGCAATAGGTAGATGGGGAAATTTTTTTAAT AATGAAGCTTTTGGGATACCTACAAATTTACCTTGGAAATTATTTATACCTTATAGATTTAGGCCAGAAATCTTCTCAAC ACAAGATTATTTTCACCCTACCTTTCTTTATGAATCCGTATGGAATATTTTTGTTTTTGGCATACTGATTTTTCTTTTTA GAAAGTCAAATAAAAAAGAACTTAAGCTTCCACCTGGTAGCTTAAGTTGCTTGTATTTAATCACTTACAGCTTAGGCAGG TTTTGGATAGAAGGCTTAAGAACTGATCCTCTCTGCTTGGGTGGGGTTCCACCTTTTTGTGAGGGAGGACTAAGAATCGC ACAATTGATTAGCTTATTTTTAATTAGTGCAGGTTTATTAGGAATATGGAGAATTTATGTTTCTAAAAAAGCGCTCCCCG ATCCTTCCTCAATTAATGGGAGAAATCAATGA
Upstream 100 bases:
>100_bases TTCTTTATAGGAGTTGGCTTATCCCAAATAATGCTAGTTCTTAAAAAGAAACAAGTAGAAAAAGTTCAAGCTGCTGAAGG AATATAAATTCAACTAGTTG
Downstream 100 bases:
>100_bases ATCCGATTTCAATTGTTGGCGCAGGTCCAGGCGCTTTAGACTTAATGACAATAAGAGCTCAACAAAGAATTAAATCAGCA GATGTTCTTCTTTGGACAGA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MEHIFLELRSPGPDLFQLGPFSLRWYGLLIAISVLVGLNLSSELASKKGLKKSLINDLLPILVLASVIGARIYYVAFEWR NYTGKNFWSSINFLNLNIPLPSALEIWGGGIAIHGALIMGTLSIIFFCRWRKEPFWDVIDVLVPSVALGQAIGRWGNFFN NEAFGIPTNLPWKLFIPYRFRPEIFSTQDYFHPTFLYESVWNIFVFGILIFLFRKSNKKELKLPPGSLSCLYLITYSLGR FWIEGLRTDPLCLGGVPPFCEGGLRIAQLISLFLISAGLLGIWRIYVSKKALPDPSSINGRNQ
Sequences:
>Translated_303_residues MEHIFLELRSPGPDLFQLGPFSLRWYGLLIAISVLVGLNLSSELASKKGLKKSLINDLLPILVLASVIGARIYYVAFEWR NYTGKNFWSSINFLNLNIPLPSALEIWGGGIAIHGALIMGTLSIIFFCRWRKEPFWDVIDVLVPSVALGQAIGRWGNFFN NEAFGIPTNLPWKLFIPYRFRPEIFSTQDYFHPTFLYESVWNIFVFGILIFLFRKSNKKELKLPPGSLSCLYLITYSLGR FWIEGLRTDPLCLGGVPPFCEGGLRIAQLISLFLISAGLLGIWRIYVSKKALPDPSSINGRNQ >Mature_303_residues MEHIFLELRSPGPDLFQLGPFSLRWYGLLIAISVLVGLNLSSELASKKGLKKSLINDLLPILVLASVIGARIYYVAFEWR NYTGKNFWSSINFLNLNIPLPSALEIWGGGIAIHGALIMGTLSIIFFCRWRKEPFWDVIDVLVPSVALGQAIGRWGNFFN NEAFGIPTNLPWKLFIPYRFRPEIFSTQDYFHPTFLYESVWNIFVFGILIFLFRKSNKKELKLPPGSLSCLYLITYSLGR FWIEGLRTDPLCLGGVPPFCEGGLRIAQLISLFLISAGLLGIWRIYVSKKALPDPSSINGRNQ
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=297, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_PROM1 (A2C0R7)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014342.1 - STRING: A2C0R7 - GeneID: 4780865 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_05151 - eggNOG: COG0682 - HOGENOM: HBG450278 - OMA: MAQFISI - ProtClustDB: PRK00052 - BioCyc: PMAR167555:NATL1_05151-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 34311; Mature: 34311
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1feed5e0)-; HASH(0x1e7f78e0)-; HASH(0x1ef0e88c)-; HASH(0x1fba2800)-; HASH(0x1ff06178)-; HASH(0x1ff06148)-; HASH(0x1ff19704)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHIFLELRSPGPDLFQLGPFSLRWYGLLIAISVLVGLNLSSELASKKGLKKSLINDLLP CCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH ILVLASVIGARIYYVAFEWRNYTGKNFWSSINFLNLNIPLPSALEIWGGGIAIHGALIMG HHHHHHHHHHEEEEEEEEECCCCCCHHHCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHH TLSIIFFCRWRKEPFWDVIDVLVPSVALGQAIGRWGNFFNNEAFGIPTNLPWKLFIPYRF HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECEEE RPEIFSTQDYFHPTFLYESVWNIFVFGILIFLFRKSNKKELKLPPGSLSCLYLITYSLGR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHH FWIEGLRTDPLCLGGVPPFCEGGLRIAQLISLFLISAGLLGIWRIYVSKKALPDPSSING HHHHCCCCCCEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RNQ CCH >Mature Secondary Structure MEHIFLELRSPGPDLFQLGPFSLRWYGLLIAISVLVGLNLSSELASKKGLKKSLINDLLP CCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH ILVLASVIGARIYYVAFEWRNYTGKNFWSSINFLNLNIPLPSALEIWGGGIAIHGALIMG HHHHHHHHHHEEEEEEEEECCCCCCHHHCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHH TLSIIFFCRWRKEPFWDVIDVLVPSVALGQAIGRWGNFFNNEAFGIPTNLPWKLFIPYRF HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECEEE RPEIFSTQDYFHPTFLYESVWNIFVFGILIFLFRKSNKKELKLPPGSLSCLYLITYSLGR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHH FWIEGLRTDPLCLGGVPPFCEGGLRIAQLISLFLISAGLLGIWRIYVSKKALPDPSSING HHHHCCCCCCEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RNQ CCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA