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The map label for this gene is petA

Identifier: 124025227

GI number: 124025227

Start: 470449

End: 471414

Strand: Reverse

Name: petA

Synonym: NATL1_05161

Alternate gene names: 124025227

Gene position: 471414-470449 (Counterclockwise)

Preceding gene: 124025228

Following gene: 124025226

Centisome position: 25.28

GC content: 34.99

Gene sequence:

>966_bases
ATGAAAAAAAACTTTTATACCATTTCTAAAACCATGAGTCGTTCATTAAAACTTATTCTCTTTTCAGTTTTTATTGGATT
TTCAATATTTTTAATTCCTCAACCAACTTGGGCCTACCCATTTTGGGCTCAACAAAAATTTGAAAATCCTAGAGAGGCAA
CTGGAAAAATTGTTTGTGCTAATTGTCATGTAGCTAGCATGCCAACAAGAGCTGAAGTGCCTCAGGCAGTTGCTGCTGAT
AGTGTTTTCAAAACAGTCGTAGAAATACCCTATAAAAAGGACCTACAAGAGATTGGAGCTGATGGAAGCAAAGTTCCTCT
CCAAGTCGGAGCCGTTGTAATGCTTCCAGATGGATTTAAACTTGCACCTCAAGAAAGATGGACTGATGAAATAAAAGAAG
AGACACAAGGTGTTTACTTCACCCAATACAGCGAGGAACAAGAAAATATTATTTTAGTAGGTCCTTTACCTGGGGATCAA
AATAGAGAGATTGTCTTCCCTGTATTATCACCTGATCCAAGAAAAGACAGCAATTATAATTTTGGAAAGTATTCAATTCA
TGTAGGGGGTAACAGAGGAAGAGGTCAAGTTTATCCAACTGGTGAGAAGAGCAATAACAATTTGTTTACTGCAACAAATT
CAGGGACAATAACTTCAATAGAAACTAATGAAGATGGAACACAAATAATTAATCTAAACAATGAAGAAGGAGAAAGTTTT
ACTGAAAATCTTCCTGCAGGGACTTCATTATTAATAAAAGAAGGCGACACTATTGAGAAAGGTGCAAAATTAACTGAAGA
TCCAAATGTTGGAGGTTTTGGTCAACTTGACAAAGAGATAGTTTTACAAAGTAAAGCAAGAGTTATTGGAATGATAATTT
TCTTTATAGGAGTTGGCTTATCCCAAATAATGCTAGTTCTTAAAAAGAAACAAGTAGAAAAAGTTCAAGCTGCTGAAGGA
ATATAA

Upstream 100 bases:

>100_bases
ATAGCTCATGTCTCAATTGAGGATGATCAAGTTCTAGTAAGTCAGTGGACAGAAACTGATTTTCGAACTGGTACTGATCC
TTGGTGGGGATGATAAATAA

Downstream 100 bases:

>100_bases
ATTCAACTAGTTGATGGAACATATTTTTTTAGAGCTTAGATCACCTGGGCCTGATTTGTTTCAACTGGGCCCTTTTTCTT
TAAGGTGGTATGGATTGCTA

Product: apocytochrome f

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKKNFYTISKTMSRSLKLILFSVFIGFSIFLIPQPTWAYPFWAQQKFENPREATGKIVCANCHVASMPTRAEVPQAVAAD
SVFKTVVEIPYKKDLQEIGADGSKVPLQVGAVVMLPDGFKLAPQERWTDEIKEETQGVYFTQYSEEQENIILVGPLPGDQ
NREIVFPVLSPDPRKDSNYNFGKYSIHVGGNRGRGQVYPTGEKSNNNLFTATNSGTITSIETNEDGTQIINLNNEEGESF
TENLPAGTSLLIKEGDTIEKGAKLTEDPNVGGFGQLDKEIVLQSKARVIGMIIFFIGVGLSQIMLVLKKKQVEKVQAAEG
I

Sequences:

>Translated_321_residues
MKKNFYTISKTMSRSLKLILFSVFIGFSIFLIPQPTWAYPFWAQQKFENPREATGKIVCANCHVASMPTRAEVPQAVAAD
SVFKTVVEIPYKKDLQEIGADGSKVPLQVGAVVMLPDGFKLAPQERWTDEIKEETQGVYFTQYSEEQENIILVGPLPGDQ
NREIVFPVLSPDPRKDSNYNFGKYSIHVGGNRGRGQVYPTGEKSNNNLFTATNSGTITSIETNEDGTQIINLNNEEGESF
TENLPAGTSLLIKEGDTIEKGAKLTEDPNVGGFGQLDKEIVLQSKARVIGMIIFFIGVGLSQIMLVLKKKQVEKVQAAEG
I
>Mature_321_residues
MKKNFYTISKTMSRSLKLILFSVFIGFSIFLIPQPTWAYPFWAQQKFENPREATGKIVCANCHVASMPTRAEVPQAVAAD
SVFKTVVEIPYKKDLQEIGADGSKVPLQVGAVVMLPDGFKLAPQERWTDEIKEETQGVYFTQYSEEQENIILVGPLPGDQ
NREIVFPVLSPDPRKDSNYNFGKYSIHVGGNRGRGQVYPTGEKSNNNLFTATNSGTITSIETNEDGTQIINLNNEEGESF
TENLPAGTSLLIKEGDTIEKGAKLTEDPNVGGFGQLDKEIVLQSKARVIGMIIFFIGVGLSQIMLVLKKKQVEKVQAAEG
I

Specific function: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome f family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYF_PROM1 (A2C0R8)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001014343.1
- ProteinModelPortal:   A2C0R8
- SMR:   A2C0R8
- STRING:   A2C0R8
- GeneID:   4780848
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_05161
- eggNOG:   NOG04227
- HOGENOM:   HBG750208
- OMA:   AYPFWAQ
- ProtClustDB:   PRK02693
- BioCyc:   PMAR167555:NATL1_05161-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_00610
- InterPro:   IPR002325
- InterPro:   IPR011054
- Gene3D:   G3DSA:2.60.40.830
- PRINTS:   PR00610

Pfam domain/function: PF01333 Apocytochr_F_C; SSF49441 Apocyt_F; SSF51246 Rudmnt_hyb_motif

EC number: NA

Molecular weight: Translated: 35444; Mature: 35444

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS51010 CYTF; PS01094 UPF0076

Important sites: BINDING 59-59 BINDING 62-62

Signals:

None

Transmembrane regions:

HASH(0x1f5d6270)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNFYTISKTMSRSLKLILFSVFIGFSIFLIPQPTWAYPFWAQQKFENPREATGKIVCA
CCCCEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHCCCCCHHCCEEEEE
NCHVASMPTRAEVPQAVAADSVFKTVVEIPYKKDLQEIGADGSKVPLQVGAVVMLPDGFK
CCEEECCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEECEEEECCCCCE
LAPQERWTDEIKEETQGVYFTQYSEEQENIILVGPLPGDQNREIVFPVLSPDPRKDSNYN
ECCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC
FGKYSIHVGGNRGRGQVYPTGEKSNNNLFTATNSGTITSIETNEDGTQIINLNNEEGESF
CCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCCCCHH
TENLPAGTSLLIKEGDTIEKGAKLTEDPNVGGFGQLDKEIVLQSKARVIGMIIFFIGVGL
HHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCH
SQIMLVLKKKQVEKVQAAEGI
HHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKKNFYTISKTMSRSLKLILFSVFIGFSIFLIPQPTWAYPFWAQQKFENPREATGKIVCA
CCCCEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHCCCCCHHCCEEEEE
NCHVASMPTRAEVPQAVAADSVFKTVVEIPYKKDLQEIGADGSKVPLQVGAVVMLPDGFK
CCEEECCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEECEEEECCCCCE
LAPQERWTDEIKEETQGVYFTQYSEEQENIILVGPLPGDQNREIVFPVLSPDPRKDSNYN
ECCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC
FGKYSIHVGGNRGRGQVYPTGEKSNNNLFTATNSGTITSIETNEDGTQIINLNNEEGESF
CCEEEEEECCCCCCCCEEECCCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCCCCCHH
TENLPAGTSLLIKEGDTIEKGAKLTEDPNVGGFGQLDKEIVLQSKARVIGMIIFFIGVGL
HHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCH
SQIMLVLKKKQVEKVQAAEGI
HHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA