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The map label for this gene is cyoA [H]

Identifier: 124025211

GI number: 124025211

Start: 455597

End: 456409

Strand: Reverse

Name: cyoA [H]

Synonym: NATL1_05001

Alternate gene names: 124025211

Gene position: 456409-455597 (Counterclockwise)

Preceding gene: 124025217

Following gene: 124025210

Centisome position: 24.48

GC content: 37.88

Gene sequence:

>813_bases
TTGCCGAAACCATCGGCCATCCTAACTCTTACAACAAGTTTAATTCTTGGAATAGCTGGAGTTTGGGTTGCGTACAATGT
AGATATGCTTCCCGTGAGCGCGAGCATGAATGCTCCTGTTTACGATGAACTCTATCGAGTCCTGTTCATTATTGGCGTCA
TGCTTTTCATAGGTATGACTGCTTTAGTAATTTATAGTCTTATCCAATTTCGTCGTAGACCTGGAGAAACTGGAGATGGC
ATTGACTTAGAGGGTAATATTTCTCTCGAAATTTTCTGGACAGCAGTTCCTGCGATTGTTGTTTTATTTGTAGGTTTATA
TAGCTACGATATTTATGATCGAATGGGTGGTATGCAACCTTTAATGCATGATCACAGTGGGCAAATGGATAATCAGGCCG
AGAGAGTTTGGGGAGGGATTGGTTCTGGTCCAATTGAGTCTTCATCTAAAAATAATTCATCATCATTACCAATTGAGTTA
ACGGCAATGCAATTTGCTTTTATCTTTCATTATCCAAAAGGAGATATTATTTCGGGCGAACTTCATGTTCCTGTTGGAAG
AGAAGTTAGTTTAAAAATGGAATCTAAAGATGTAATACATGCTTTTTGGGTGCCTCAATTCAGACTTAAACAAGATGTCA
TTCCTGGCCAACCAACTATTTTAAATTTCACTCCTACAAAAGCAGGTAATTTCCCAATTGTTTGCGCAGAATTGTGTGGT
CCTTATCATGGTGGGATGAGATCAAACGTAATAGTTGATGAACAAGAAGACTTTGATACTTGGTTAAAAGAAAACTCTAA
AGAATCAATATAA

Upstream 100 bases:

>100_bases
ATAAAGATTCTCTTTAAAAAAAATTATTCATCTTGAATTAACAATTAGCCGATACATTAATTACTTTTGCCCATAACCTA
TAGATAGAAAGGAGATCTTC

Downstream 100 bases:

>100_bases
GTTCATGACTATTTCACTCAAACCAAACAACTCTTCTCCAGAAAAACTTCAACCAACAGGATGGCTCAAATATCTGAGTT
TTAGTCTTGATCACAAAGTC

Product: putative cytochrome c oxidase, subunit 2

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MPKPSAILTLTTSLILGIAGVWVAYNVDMLPVSASMNAPVYDELYRVLFIIGVMLFIGMTALVIYSLIQFRRRPGETGDG
IDLEGNISLEIFWTAVPAIVVLFVGLYSYDIYDRMGGMQPLMHDHSGQMDNQAERVWGGIGSGPIESSSKNNSSSLPIEL
TAMQFAFIFHYPKGDIISGELHVPVGREVSLKMESKDVIHAFWVPQFRLKQDVIPGQPTILNFTPTKAGNFPIVCAELCG
PYHGGMRSNVIVDEQEDFDTWLKENSKESI

Sequences:

>Translated_270_residues
MPKPSAILTLTTSLILGIAGVWVAYNVDMLPVSASMNAPVYDELYRVLFIIGVMLFIGMTALVIYSLIQFRRRPGETGDG
IDLEGNISLEIFWTAVPAIVVLFVGLYSYDIYDRMGGMQPLMHDHSGQMDNQAERVWGGIGSGPIESSSKNNSSSLPIEL
TAMQFAFIFHYPKGDIISGELHVPVGREVSLKMESKDVIHAFWVPQFRLKQDVIPGQPTILNFTPTKAGNFPIVCAELCG
PYHGGMRSNVIVDEQEDFDTWLKENSKESI
>Mature_269_residues
PKPSAILTLTTSLILGIAGVWVAYNVDMLPVSASMNAPVYDELYRVLFIIGVMLFIGMTALVIYSLIQFRRRPGETGDGI
DLEGNISLEIFWTAVPAIVVLFVGLYSYDIYDRMGGMQPLMHDHSGQMDNQAERVWGGIGSGPIESSSKNNSSSLPIELT
AMQFAFIFHYPKGDIISGELHVPVGREVSLKMESKDVIHAFWVPQFRLKQDVIPGQPTILNFTPTKAGNFPIVCAELCGP
YHGGMRSNVIVDEQEDFDTWLKENSKESI

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 29905; Mature: 29774

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPSAILTLTTSLILGIAGVWVAYNVDMLPVSASMNAPVYDELYRVLFIIGVMLFIGMT
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALVIYSLIQFRRRPGETGDGIDLEGNISLEIFWTAVPAIVVLFVGLYSYDIYDRMGGMQP
HHHHHHHHHHHHCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LMHDHSGQMDNQAERVWGGIGSGPIESSSKNNSSSLPIELTAMQFAFIFHYPKGDIISGE
HHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHEEEEEEEEECCCCCEECCE
LHVPVGREVSLKMESKDVIHAFWVPQFRLKQDVIPGQPTILNFTPTKAGNFPIVCAELCG
EECCCCCCEEEEECCCCEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHCC
PYHGGMRSNVIVDEQEDFDTWLKENSKESI
CCCCCCCCCEEEECCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PKPSAILTLTTSLILGIAGVWVAYNVDMLPVSASMNAPVYDELYRVLFIIGVMLFIGMT
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALVIYSLIQFRRRPGETGDGIDLEGNISLEIFWTAVPAIVVLFVGLYSYDIYDRMGGMQP
HHHHHHHHHHHHCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LMHDHSGQMDNQAERVWGGIGSGPIESSSKNNSSSLPIELTAMQFAFIFHYPKGDIISGE
HHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHEEEEEEEEECCCCCEECCE
LHVPVGREVSLKMESKDVIHAFWVPQFRLKQDVIPGQPTILNFTPTKAGNFPIVCAELCG
EECCCCCCEEEEECCCCEEEEECCCCHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHCC
PYHGGMRSNVIVDEQEDFDTWLKENSKESI
CCCCCCCCCEEEECCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659815; 8399373 [H]