Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is gmk [H]
Identifier: 124022377
GI number: 124022377
Start: 629196
End: 629774
Strand: Direct
Name: gmk [H]
Synonym: P9303_06681
Alternate gene names: 124022377
Gene position: 629196-629774 (Clockwise)
Preceding gene: 124022369
Following gene: 124022380
Centisome position: 23.45
GC content: 53.02
Gene sequence:
>579_bases ATGCAATCAATGGCTCCATCCGCCGCTGAAGGAAAGCTCACGGTGATTACTGGGCCCAGTGGCGTTGGTAAGGGTTCGTT GGTGAAGCAACTCCTAGAGCTCCATCCAGAGATCTGGCTGTCTATTTCGGCGACAACGCGTGAAGCCAGGCAAGGCGAGA TTGAGGGTGATCATTACTTCTTCTTGAACCGTGATCGCTTTGCAGAACTGGTTCAAGCTGGCGGTTGTCTTGAATGGGCT GAATTTGCAGGCAATCGCTATGGCACCCCACGCCAACCTGTTGAGCAGCAGCTTTCATTAGGCCGTCCGGTTTTGCTTGA GATTGAACTGGAAGGGGCCCGACAGGTGCGGCGCAGTTTCCCTGAAGCTTTTCAGATTTTTTTGGCACCGCCCAGTTTTG AGGAGCTTGAACGACGCATTCGTGGACGCGCCACTGATCCTGAAGAGGCAATTCAGCGACGTTTAGCTAGGGCGAGGGAG GAACTGATGGCTCAGCAGGAGTTTGATGCAGTGGTGATTAATGACAACCTGCAGGTTGCTGTGATTGAGCTGGAGTCTTT GATGGGTCTGAGCTGTTGA
Upstream 100 bases:
>100_bases AGCTTGAGAGGTCCATGACCTGGAGGGCAGCAGGGGCCATCGATTCAGTCGGGACCTGGATTGCACGCAGCCTTCCTACT CTGCGATCCGATTCAATGCA
Downstream 100 bases:
>100_bases TGCGAAGACTGTTTCCTTACCTTAAAGCGTTATTTGACAACATAGGCCAATAAAAAAAGCCCTTTTAGAGGGCTTTTTGA AGGGGTTTAGCCAAGAAGCT
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MQSMAPSAAEGKLTVITGPSGVGKGSLVKQLLELHPEIWLSISATTREARQGEIEGDHYFFLNRDRFAELVQAGGCLEWA EFAGNRYGTPRQPVEQQLSLGRPVLLEIELEGARQVRRSFPEAFQIFLAPPSFEELERRIRGRATDPEEAIQRRLARARE ELMAQQEFDAVVINDNLQVAVIELESLMGLSC
Sequences:
>Translated_192_residues MQSMAPSAAEGKLTVITGPSGVGKGSLVKQLLELHPEIWLSISATTREARQGEIEGDHYFFLNRDRFAELVQAGGCLEWA EFAGNRYGTPRQPVEQQLSLGRPVLLEIELEGARQVRRSFPEAFQIFLAPPSFEELERRIRGRATDPEEAIQRRLARARE ELMAQQEFDAVVINDNLQVAVIELESLMGLSC >Mature_192_residues MQSMAPSAAEGKLTVITGPSGVGKGSLVKQLLELHPEIWLSISATTREARQGEIEGDHYFFLNRDRFAELVQAGGCLEWA EFAGNRYGTPRQPVEQQLSLGRPVLLEIELEGARQVRRSFPEAFQIFLAPPSFEELERRIRGRATDPEEAIQRRLARARE ELMAQQEFDAVVINDNLQVAVIELESLMGLSC
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=175, Percent_Identity=39.4285714285714, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI4504221, Length=175, Percent_Identity=39.4285714285714, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI226874831, Length=176, Percent_Identity=39.2045454545455, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI14780902, Length=187, Percent_Identity=30.4812834224599, Blast_Score=80, Evalue=7e-16, Organism=Homo sapiens, GI38570142, Length=178, Percent_Identity=29.7752808988764, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI21361598, Length=185, Percent_Identity=27.5675675675676, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI111154074, Length=162, Percent_Identity=30.2469135802469, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI52630447, Length=186, Percent_Identity=27.4193548387097, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI4505237, Length=184, Percent_Identity=27.1739130434783, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118255, Length=184, Percent_Identity=27.1739130434783, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118259, Length=184, Percent_Identity=27.1739130434783, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI262118263, Length=184, Percent_Identity=27.1739130434783, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=182, Percent_Identity=43.4065934065934, Blast_Score=172, Evalue=1e-44, Organism=Caenorhabditis elegans, GI193203132, Length=179, Percent_Identity=36.3128491620112, Blast_Score=130, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17508835, Length=179, Percent_Identity=36.3128491620112, Blast_Score=130, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71988041, Length=181, Percent_Identity=23.7569060773481, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71988048, Length=181, Percent_Identity=23.7569060773481, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17557440, Length=188, Percent_Identity=25.531914893617, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=179, Percent_Identity=39.1061452513966, Blast_Score=141, Evalue=7e-35, Organism=Drosophila melanogaster, GI21356141, Length=178, Percent_Identity=37.6404494382022, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI116007136, Length=181, Percent_Identity=25.414364640884, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI45554489, Length=181, Percent_Identity=25.414364640884, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24640542, Length=181, Percent_Identity=25.414364640884, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI85724806, Length=181, Percent_Identity=25.414364640884, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI45554481, Length=181, Percent_Identity=25.414364640884, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI161077626, Length=181, Percent_Identity=25.414364640884, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI221330166, Length=159, Percent_Identity=27.0440251572327, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI221330162, Length=159, Percent_Identity=27.0440251572327, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330164, Length=159, Percent_Identity=27.0440251572327, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 21493; Mature: 21493
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSMAPSAAEGKLTVITGPSGVGKGSLVKQLLELHPEIWLSISATTREARQGEIEGDHYF CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHEEEEECCHHHHHCCCCCCCEEE FLNRDRFAELVQAGGCLEWAEFAGNRYGTPRQPVEQQLSLGRPVLLEIELEGARQVRRSF EECHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHC PEAFQIFLAPPSFEELERRIRGRATDPEEAIQRRLARAREELMAQQEFDAVVINDNLQVA HHHHEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEE VIELESLMGLSC EEEEHHHCCCCC >Mature Secondary Structure MQSMAPSAAEGKLTVITGPSGVGKGSLVKQLLELHPEIWLSISATTREARQGEIEGDHYF CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHEEEEECCHHHHHCCCCCCCEEE FLNRDRFAELVQAGGCLEWAEFAGNRYGTPRQPVEQQLSLGRPVLLEIELEGARQVRRSF EECHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHC PEAFQIFLAPPSFEELERRIRGRATDPEEAIQRRLARAREELMAQQEFDAVVINDNLQVA HHHHEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEE VIELESLMGLSC EEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]