Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is qri7
Identifier: 124022380
GI number: 124022380
Start: 630674
End: 631744
Strand: Direct
Name: qri7
Synonym: P9303_06711
Alternate gene names: 124022380
Gene position: 630674-631744 (Clockwise)
Preceding gene: 124022377
Following gene: 124022381
Centisome position: 23.51
GC content: 56.77
Gene sequence:
>1071_bases ATGCCGACGGTGCTTGCCCTCGAAACAAGTTGTGACGAGTCGGCTGCCGCAGTCCTACGTCTAAATAACGGGTGTTTGCA GGTTATCGCTAGCCGAATTGCTTCTCAGGTTGAGAAACATGCCCAGTGGGGAGGCGTGGTACCGGAAGTGGCCTCTCGCT TGCATGTGGAGGCTCTGCCTCATCTTGTGGAGGAGGTTTTGCAGGAGGCGGGACAGTCGATGGCTCGCTTTGATGCTGTA GCTGCAACGGTGACCCCTGGGCTGGCCGGAGCACTGATGGTGGGATCGGTGACAGGCCGATGTTTGGCTGCTCTCCATGC GCTGCCTTTTTTTGGCATTCATCACCTGGAGGGGCATTTGGCTTCAGTGCTTTTGGCGGAACACCCTCCACGCCCTCCTT ATCTGGTGCTACTTGTGAGCGGGGGACACACTGAGTTGATTCGGGTCGGGGCAGAGAGTGAGATGGTGCGTCTTGGACGT AGCCATGATGATGCTGCTGGAGAGGCCTTTGACAAAGTTGGCCGTTTGCTCGGTTTGGCCTATCCAGGTGGCCCCGCTAT TCAGGCGCTGGCCGCGGCCGGAGACTCTGGCAGATTTTCTTTGCCCAAAGGACGGGTCTCTAAGCCTGGTGGTGGCTTTC ATCCCTACGATTTCTCTTTCAGCGGATTGAAGACCGCCATGCTGCGCCTGGTTCAGGCTCTTTCAGAGGCTGGTGAAGAC CTGCCCCGCGCAGATCTTGCTGCCAGTTTTGAGCAAGTGGTTGCAGATGTTTTGGTCGAGCGCAGCTTGCTCTGCGCTAA TGACCAGGGCCTAAAAACTGTGGTGATGGTTGGAGGAGTCGCGGCTAACCGCCGCCTAAGAGAACTGATGAGCAAACGTG GACAAGAACAGGGGATTGAAGTGCACACGGCACCGCTTCGATACTGCACGGATAATGCCGCCATGATTGGAGCAGCGGCC TTGCAGCGCTTGGTGTCTGGGGATGATGCCAGCTCTCTTGAGTTGGGAGTGGCAGCCCGATGGCCATTAGACAAAACCGA GGATTTGTACCATTCACCTCCCCCATTTTGA
Upstream 100 bases:
>100_bases ACAACGGCGAAGAGACGACGCATCGGTTTCGATTCCTGTAAGACCTGCTCCGGAACGGCAGGATGTCACAAGTAAAATGT AAATGAGGCTTCCCACAACC
Downstream 100 bases:
>100_bases AGAAGCGAATTAGCTTGACCTTGTCTGCTGTGCAGCGATGGCTTCTGAATCTCCACTTGATTCCAACACCTCTGCGGAAC CTGTCAGTAGTGAAGAGCTA
Product: DNA-binding/iron metalloprotein/AP endonuclease
Products: NA
Alternate protein names: Glycoprotease
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPTVLALETSCDESAAAVLRLNNGCLQVIASRIASQVEKHAQWGGVVPEVASRLHVEALPHLVEEVLQEAGQSMARFDAV AATVTPGLAGALMVGSVTGRCLAALHALPFFGIHHLEGHLASVLLAEHPPRPPYLVLLVSGGHTELIRVGAESEMVRLGR SHDDAAGEAFDKVGRLLGLAYPGGPAIQALAAAGDSGRFSLPKGRVSKPGGGFHPYDFSFSGLKTAMLRLVQALSEAGED LPRADLAASFEQVVADVLVERSLLCANDQGLKTVVMVGGVAANRRLRELMSKRGQEQGIEVHTAPLRYCTDNAAMIGAAA LQRLVSGDDASSLELGVAARWPLDKTEDLYHSPPPF
Sequences:
>Translated_356_residues MPTVLALETSCDESAAAVLRLNNGCLQVIASRIASQVEKHAQWGGVVPEVASRLHVEALPHLVEEVLQEAGQSMARFDAV AATVTPGLAGALMVGSVTGRCLAALHALPFFGIHHLEGHLASVLLAEHPPRPPYLVLLVSGGHTELIRVGAESEMVRLGR SHDDAAGEAFDKVGRLLGLAYPGGPAIQALAAAGDSGRFSLPKGRVSKPGGGFHPYDFSFSGLKTAMLRLVQALSEAGED LPRADLAASFEQVVADVLVERSLLCANDQGLKTVVMVGGVAANRRLRELMSKRGQEQGIEVHTAPLRYCTDNAAMIGAAA LQRLVSGDDASSLELGVAARWPLDKTEDLYHSPPPF >Mature_355_residues PTVLALETSCDESAAAVLRLNNGCLQVIASRIASQVEKHAQWGGVVPEVASRLHVEALPHLVEEVLQEAGQSMARFDAVA ATVTPGLAGALMVGSVTGRCLAALHALPFFGIHHLEGHLASVLLAEHPPRPPYLVLLVSGGHTELIRVGAESEMVRLGRS HDDAAGEAFDKVGRLLGLAYPGGPAIQALAAAGDSGRFSLPKGRVSKPGGGFHPYDFSFSGLKTAMLRLVQALSEAGEDL PRADLAASFEQVVADVLVERSLLCANDQGLKTVVMVGGVAANRRLRELMSKRGQEQGIEVHTAPLRYCTDNAAMIGAAAL QRLVSGDDASSLELGVAARWPLDKTEDLYHSPPPF
Specific function: Could Be A Metalloprotease. [C]
COG id: COG0533
COG function: function code O; Metal-dependent proteases with possible chaperone activity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family
Homologues:
Organism=Homo sapiens, GI116812636, Length=351, Percent_Identity=34.4729344729345, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI8923380, Length=349, Percent_Identity=29.512893982808, Blast_Score=118, Evalue=7e-27, Organism=Escherichia coli, GI1789445, Length=340, Percent_Identity=45, Blast_Score=271, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17557464, Length=343, Percent_Identity=34.1107871720117, Blast_Score=148, Evalue=4e-36, Organism=Caenorhabditis elegans, GI71995670, Length=307, Percent_Identity=28.6644951140065, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320099, Length=369, Percent_Identity=27.3712737127371, Blast_Score=106, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6322891, Length=294, Percent_Identity=26.8707482993197, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI20129063, Length=359, Percent_Identity=30.3621169916435, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI21357207, Length=319, Percent_Identity=29.7805642633229, Blast_Score=122, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GCP_PROM3 (A2C7G2)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016687.1 - ProteinModelPortal: A2C7G2 - SMR: A2C7G2 - STRING: A2C7G2 - MEROPS: M22.001 - GeneID: 4776277 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_06711 - eggNOG: COG0533 - HOGENOM: HBG304663 - OMA: PLYGVNH - ProtClustDB: PRK09604 - GO: GO:0006508 - HAMAP: MF_01445 - InterPro: IPR022450 - InterPro: IPR000905 - InterPro: IPR017861 - PANTHER: PTHR11735 - PRINTS: PR00789 - TIGRFAMs: TIGR03723 - TIGRFAMs: TIGR00329
Pfam domain/function: PF00814 Peptidase_M22
EC number: =3.4.24.57
Molecular weight: Translated: 37484; Mature: 37353
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS01016 GLYCOPROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVLALETSCDESAAAVLRLNNGCLQVIASRIASQVEKHAQWGGVVPEVASRLHVEALP CCCEEEEECCCCCHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HLVEEVLQEAGQSMARFDAVAATVTPGLAGALMVGSVTGRCLAALHALPFFGIHHLEGHL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVLLAEHPPRPPYLVLLVSGGHTELIRVGAESEMVRLGRSHDDAAGEAFDKVGRLLGLA HHHHHHCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHCC YPGGPAIQALAAAGDSGRFSLPKGRVSKPGGGFHPYDFSFSGLKTAMLRLVQALSEAGED CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC LPRADLAASFEQVVADVLVERSLLCANDQGLKTVVMVGGVAANRRLRELMSKRGQEQGIE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHCCCE VHTAPLRYCTDNAAMIGAAALQRLVSGDDASSLELGVAARWPLDKTEDLYHSPPPF EEECCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECEEEECCCCCCHHHCCCCCCC >Mature Secondary Structure PTVLALETSCDESAAAVLRLNNGCLQVIASRIASQVEKHAQWGGVVPEVASRLHVEALP CCEEEEECCCCCHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HLVEEVLQEAGQSMARFDAVAATVTPGLAGALMVGSVTGRCLAALHALPFFGIHHLEGHL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVLLAEHPPRPPYLVLLVSGGHTELIRVGAESEMVRLGRSHDDAAGEAFDKVGRLLGLA HHHHHHCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHCC YPGGPAIQALAAAGDSGRFSLPKGRVSKPGGGFHPYDFSFSGLKTAMLRLVQALSEAGED CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC LPRADLAASFEQVVADVLVERSLLCANDQGLKTVVMVGGVAANRRLRELMSKRGQEQGIE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHCCCE VHTAPLRYCTDNAAMIGAAALQRLVSGDDASSLELGVAARWPLDKTEDLYHSPPPF EEECCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECEEEECCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA