Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is ppx [H]
Identifier: 124022369
GI number: 124022369
Start: 620151
End: 621797
Strand: Direct
Name: ppx [H]
Synonym: P9303_06591
Alternate gene names: 124022369
Gene position: 620151-621797 (Clockwise)
Preceding gene: 124022366
Following gene: 124022377
Centisome position: 23.12
GC content: 54.58
Gene sequence:
>1647_bases TTGCCTTTCGGTGTGGTTGATGTCGAGCAGGAGGAGGCCAGGTACGCCAGTGCTGGTCAGCTCCGTTCTGAGCGAGAGCT CCGCAATGTTGCTGCGATTGATATTGGAACCAATTCCACCCATCTCCTGGTGGCGTCGGTTGATCCTTCTCTGCACACCT TCAGCGTTGATCTTGCAGAGAAATCAACCACAAGACTGGGTGAGCGAGACCCTGACTCTGGAGAGCTCACGGGTCCTGCT ATGGAGCGGGTATTTGAAACACTCAAACGTTTTAAGGAGCTAGCCGCCAGCCACCAGGTGGAGCAGGTGGTTGCGTCGGC GACTAGCGCAGTACGTGAAGCTTCAAATGGGCGAGATTTTTTGCAACGGATTCAGGATCAGCTCGGCCTTGAGGTGGATC TGTTGAGCGGTGCTGAGGAAGCACGACTGATCTATTTGGGTGTTTTGTCTGGCATGCCTTTTGGGGAGTGTCCCCATCTT TTGCTCGATATCGGTGGCGGGTCCACAGAGCTCATCCTCGCGGATGGTCGCGATGCTCGGGCTCTGACAAGCACGCGGGT TGGTGCGGTTCGGCTACAGAGGGATTTTGTCAAGCATGAACCAATCCCCCCTCAACGGCGTTCCTTTTTGCAGACATTTA TCCAGGGTTCTTTAGAGCCAGCTGTTGATAAGGTCTGCCGTCGCATCAATCCTGGGGAGAGCCCTGTGATGGTTGCCACC AGTGGAACCGCCATGGCCATCGGTGCTTTGTTGGCTAGCGAAGATGATCGCCCTCCGTTGAGATTGCATGGCTATCGATT CTCACGGCAGCGGCTTGATGGCCTGGTTGAGAAGCTGATAGCGATGACGCCTGAGCAGCGTCGCATCCAGACGCCGATTA ATGATCGCCGTTCCGAAATCATCGTTCCGGGTGCGCTGATTCTTCAAACCGCCATGCAGATGCTCGCTGCTGATGAGCTG GTGCTGAGTGAAAGGGCTCTGAGGGAGGGTTTGATCGTTGACTGGATGCTGCGACACGGCCTACTGGAGGATCGCTTTAG TTTTCAGAGCAGTATTCGTCAGCGCACCGTGATTCATCAGGTGCAGCGTTTTGCAGTGAATCACCGCCGTGCAGAGCGTG TAGCCAGCCATGCACTCAGCCTTTACGACCACACACATGGTGTTCTTCATCACGATGATGGAGGTGGTCGGGATCTGCTT TGGGCATCGGCAATGTTGCATGCCTGTGGTCAGCACATCAATCTCAGTGCTTATCACAAGCATTCCTGGTATCTGATTCG TCATGGCGAGTTGCTCGGCTATTCGGAAGCGGAGCATTTGATGGTTGCGGCTATTGCGCGCTATCACCGCCGCAGTCTTC CCAAGAAGCGCCATCTGGAATGGCAGGCTTTGGCCACCCGGGAGCATCGTCGTCTCGTTGCCGAGATGGCTTTGTTGCTG CGATTAGCAGCAGCCATTGATCGTCGTCCTGAGCCAGTGGTGGCTGCAATCAGAGTGGAGTCCGCTGATGATGATCAGGT TGTCTTTGAACTCGTGCCGGAAGGATTGAATCAGAACCTCAGCCTTGAACAATGGAGCTTGAAGAGCTGTGCTTCGGTTG TGAAAGAAGCAAGCGGCGTAACCATGAAAGTTGTCGTTGAGGAATGA
Upstream 100 bases:
>100_bases TGGGTTTGAAGAACCCTAGGGAGGGACCTCCAGACATCGTTGGCTGATGGCAAAGTGGTCTCGTTCCAGGCTCCTGTACT TCATGCCAGGTGTCGAGCCA
Downstream 100 bases:
>100_bases ACTTAGTTCAGCATTAGGTTGTTGTTGTTGTTGGTTAATTGATGCCAGTGGATCTTTCTGATTTTGCCCAGAGCAGTAGG CGGTTTTCGATTATGAGTTA
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MPFGVVDVEQEEARYASAGQLRSERELRNVAAIDIGTNSTHLLVASVDPSLHTFSVDLAEKSTTRLGERDPDSGELTGPA MERVFETLKRFKELAASHQVEQVVASATSAVREASNGRDFLQRIQDQLGLEVDLLSGAEEARLIYLGVLSGMPFGECPHL LLDIGGGSTELILADGRDARALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAVDKVCRRINPGESPVMVAT SGTAMAIGALLASEDDRPPLRLHGYRFSRQRLDGLVEKLIAMTPEQRRIQTPINDRRSEIIVPGALILQTAMQMLAADEL VLSERALREGLIVDWMLRHGLLEDRFSFQSSIRQRTVIHQVQRFAVNHRRAERVASHALSLYDHTHGVLHHDDGGGRDLL WASAMLHACGQHINLSAYHKHSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQALATREHRRLVAEMALLL RLAAAIDRRPEPVVAAIRVESADDDQVVFELVPEGLNQNLSLEQWSLKSCASVVKEASGVTMKVVVEE
Sequences:
>Translated_548_residues MPFGVVDVEQEEARYASAGQLRSERELRNVAAIDIGTNSTHLLVASVDPSLHTFSVDLAEKSTTRLGERDPDSGELTGPA MERVFETLKRFKELAASHQVEQVVASATSAVREASNGRDFLQRIQDQLGLEVDLLSGAEEARLIYLGVLSGMPFGECPHL LLDIGGGSTELILADGRDARALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAVDKVCRRINPGESPVMVAT SGTAMAIGALLASEDDRPPLRLHGYRFSRQRLDGLVEKLIAMTPEQRRIQTPINDRRSEIIVPGALILQTAMQMLAADEL VLSERALREGLIVDWMLRHGLLEDRFSFQSSIRQRTVIHQVQRFAVNHRRAERVASHALSLYDHTHGVLHHDDGGGRDLL WASAMLHACGQHINLSAYHKHSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQALATREHRRLVAEMALLL RLAAAIDRRPEPVVAAIRVESADDDQVVFELVPEGLNQNLSLEQWSLKSCASVVKEASGVTMKVVVEE >Mature_547_residues PFGVVDVEQEEARYASAGQLRSERELRNVAAIDIGTNSTHLLVASVDPSLHTFSVDLAEKSTTRLGERDPDSGELTGPAM ERVFETLKRFKELAASHQVEQVVASATSAVREASNGRDFLQRIQDQLGLEVDLLSGAEEARLIYLGVLSGMPFGECPHLL LDIGGGSTELILADGRDARALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAVDKVCRRINPGESPVMVATS GTAMAIGALLASEDDRPPLRLHGYRFSRQRLDGLVEKLIAMTPEQRRIQTPINDRRSEIIVPGALILQTAMQMLAADELV LSERALREGLIVDWMLRHGLLEDRFSFQSSIRQRTVIHQVQRFAVNHRRAERVASHALSLYDHTHGVLHHDDGGGRDLLW ASAMLHACGQHINLSAYHKHSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQALATREHRRLVAEMALLLR LAAAIDRRPEPVVAAIRVESADDDQVVFELVPEGLNQNLSLEQWSLKSCASVVKEASGVTMKVVVEE
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=436, Percent_Identity=28.6697247706422, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI48994966, Length=427, Percent_Identity=28.5714285714286, Blast_Score=133, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 61049; Mature: 60917
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFGVVDVEQEEARYASAGQLRSERELRNVAAIDIGTNSTHLLVASVDPSLHTFSVDLAE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCCCCEEEEEEHHH KSTTRLGERDPDSGELTGPAMERVFETLKRFKELAASHQVEQVVASATSAVREASNGRDF HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LQRIQDQLGLEVDLLSGAEEARLIYLGVLSGMPFGECPHLLLDIGGGSTELILADGRDAR HHHHHHHHCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCH ALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAVDKVCRRINPGESPVMVAT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEE SGTAMAIGALLASEDDRPPLRLHGYRFSRQRLDGLVEKLIAMTPEQRRIQTPINDRRSEI CCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEE IVPGALILQTAMQMLAADELVLSERALREGLIVDWMLRHGLLEDRFSFQSSIRQRTVIHQ ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VQRFAVNHRRAERVASHALSLYDHTHGVLHHDDGGGRDLLWASAMLHACGQHINLSAYHK HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEC HSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQALATREHRRLVAEMALLL CCEEEEECCCEECCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHH RLAAAIDRRPEPVVAAIRVESADDDQVVFELVPEGLNQNLSLEQWSLKSCASVVKEASGV HHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC TMKVVVEE EEEEEEEC >Mature Secondary Structure PFGVVDVEQEEARYASAGQLRSERELRNVAAIDIGTNSTHLLVASVDPSLHTFSVDLAE CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCCCCEEEEEEHHH KSTTRLGERDPDSGELTGPAMERVFETLKRFKELAASHQVEQVVASATSAVREASNGRDF HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LQRIQDQLGLEVDLLSGAEEARLIYLGVLSGMPFGECPHLLLDIGGGSTELILADGRDAR HHHHHHHHCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCH ALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAVDKVCRRINPGESPVMVAT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEE SGTAMAIGALLASEDDRPPLRLHGYRFSRQRLDGLVEKLIAMTPEQRRIQTPINDRRSEI CCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEE IVPGALILQTAMQMLAADELVLSERALREGLIVDWMLRHGLLEDRFSFQSSIRQRTVIHQ ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VQRFAVNHRRAERVASHALSLYDHTHGVLHHDDGGGRDLLWASAMLHACGQHINLSAYHK HHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEC HSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQALATREHRRLVAEMALLL CCEEEEECCCEECCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHH RLAAAIDRRPEPVVAAIRVESADDDQVVFELVPEGLNQNLSLEQWSLKSCASVVKEASGV HHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC TMKVVVEE EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]