Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022366
Identifier: 124022366
GI number: 124022366
Start: 617611
End: 618195
Strand: Direct
Name: 124022366
Synonym: P9303_06561
Alternate gene names: NA
Gene position: 617611-618195 (Clockwise)
Preceding gene: 124022365
Following gene: 124022369
Centisome position: 23.02
GC content: 39.83
Gene sequence:
>585_bases GTGAGCTATAAATTAGAAGCAGTGAAGCATGAGAAATTGCTCAAGGAACTGACCCCTATTTCTCTTCTTATAAGTGGAAT ATTATTTCCAGCAGACGCTTTAAGTAATGATGTCTTGATGAGTTGCTCTACTTCAAGCAATGTCGCTCATCACTATTCCT CTCCTTACTCCTCAAGAAAGCCTGAACGGAGACTTATAATTAATGTGAAACAGAGTCAGGTGACAGATGTTTCTAGTAAT CGTCTGCTGCGAGTTCCGGCACCTTACAAGGTGGTCAAAATTACTCCATCTTTAATCGAATTCAAGGACTCCAATAATTC AGAAGTCGCCTATCGGATAGATAGATATAATTTGAGTTATATTGAATCAAGGAAAGATTATGAGCATAAATGCAAGGATA TTTGTCTCGATAGGAGCTATCAAGGTAATCAAATGTCCAAGGACATATTGGATCTATATTTAGATATCAAGGTTCAAAGC CCCGGTGCATATTGTAAATCTTGCGCAATAAGGGGCCAGTTAGTAACTGGGAGATGCAAAATCCTTCGAGAGGGGCAGAA CTTAATGGCTGTCCCGCGGGTTTGA
Upstream 100 bases:
>100_bases GGCCAGCCCTGCCAATATCAAGGTGACTACACCGTTTGACCTCACGGTGGCCGAAGCAGTGCTTGCGCTTAGGGCAAAAA GGCAGATAGGTCTCTAGAAA
Downstream 100 bases:
>100_bases GTTTCAGAGAAGTCGTCTATATTTTGAAATTGAGCATCGAAATACTTAGAATCAGCGCAGAAGTATTAGTCGACCATGGC TGCCGTCAAGCTGGGCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSYKLEAVKHEKLLKELTPISLLISGILFPADALSNDVLMSCSTSSNVAHHYSSPYSSRKPERRLIINVKQSQVTDVSSN RLLRVPAPYKVVKITPSLIEFKDSNNSEVAYRIDRYNLSYIESRKDYEHKCKDICLDRSYQGNQMSKDILDLYLDIKVQS PGAYCKSCAIRGQLVTGRCKILREGQNLMAVPRV
Sequences:
>Translated_194_residues MSYKLEAVKHEKLLKELTPISLLISGILFPADALSNDVLMSCSTSSNVAHHYSSPYSSRKPERRLIINVKQSQVTDVSSN RLLRVPAPYKVVKITPSLIEFKDSNNSEVAYRIDRYNLSYIESRKDYEHKCKDICLDRSYQGNQMSKDILDLYLDIKVQS PGAYCKSCAIRGQLVTGRCKILREGQNLMAVPRV >Mature_193_residues SYKLEAVKHEKLLKELTPISLLISGILFPADALSNDVLMSCSTSSNVAHHYSSPYSSRKPERRLIINVKQSQVTDVSSNR LLRVPAPYKVVKITPSLIEFKDSNNSEVAYRIDRYNLSYIESRKDYEHKCKDICLDRSYQGNQMSKDILDLYLDIKVQSP GAYCKSCAIRGQLVTGRCKILREGQNLMAVPRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22033; Mature: 21902
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKLEAVKHEKLLKELTPISLLISGILFPADALSNDVLMSCSTSSNVAHHYSSPYSSRK CCEEHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCEEEEECCCCCCHHHCCCCCCCCC PERRLIINVKQSQVTDVSSNRLLRVPAPYKVVKITPSLIEFKDSNNSEVAYRIDRYNLSY CCCEEEEEECHHHCCCCCCCCEEECCCCEEEEEECHHHEEEECCCCCEEEEEEECCCCHH IESRKDYEHKCKDICLDRSYQGNQMSKDILDLYLDIKVQSPGAYCKSCAIRGQLVTGRCK HHCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEEEEEECCCCHHHHHHHHCCEEEECHHH ILREGQNLMAVPRV EEECCCCEEECCCC >Mature Secondary Structure SYKLEAVKHEKLLKELTPISLLISGILFPADALSNDVLMSCSTSSNVAHHYSSPYSSRK CEEHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCEEEEECCCCCCHHHCCCCCCCCC PERRLIINVKQSQVTDVSSNRLLRVPAPYKVVKITPSLIEFKDSNNSEVAYRIDRYNLSY CCCEEEEEECHHHCCCCCCCCEEECCCCEEEEEECHHHEEEECCCCCEEEEEEECCCCHH IESRKDYEHKCKDICLDRSYQGNQMSKDILDLYLDIKVQSPGAYCKSCAIRGQLVTGRCK HHCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEEEEEECCCCHHHHHHHHCCEEEECHHH ILREGQNLMAVPRV EEECCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA