Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is yybO [H]

Identifier: 124022171

GI number: 124022171

Start: 463539

End: 464894

Strand: Reverse

Name: yybO [H]

Synonym: P9303_04611

Alternate gene names: 124022171

Gene position: 464894-463539 (Counterclockwise)

Preceding gene: 124022172

Following gene: 124022169

Centisome position: 17.33

GC content: 54.57

Gene sequence:

>1356_bases
ATGACATCAAATCCTGGCGAATCAAGAAGCATCCAGAGCCAGAGTTCCGCACAGCAACGAATCAGCAATCTTCATGGTCA
AGCCCAGCGCGCCCGCCGGGGTTGGCGACCCTGGATTCTCTTTCTAGTTTGCTCCCTTTTCTATTTCTACGAGTTCTTCG
CACGAGTGGCCCCGGGCGTCCTACAACCCGAATTGATGCGGGTCACCGGCTCGAGCCAAGGAGAGTTTGGCCTCGCCATG
GGAATGTATTTTCTCGCATACGCTCCCTCACAGCTTCTTGTAGGCCGCCTTCTCGATCGCTTCGGAGTCCGTGCCGTCGT
TGCCCCAGCGGCACTTGTCGTAGCCCTGGGTTGTCTGCTCTTTGCCAGCACCAACAATGTGGTGGTGCTTGGACTAGGGC
GCTTGATGCAGGGATTGGGCAGTTCAGTTGCTTATCTCGGCGTCATCTATCTCGCCATGATCTGGTTCCCGCCAAAACGC
CATGGGATGGTCCCGGGTTTAACCGTAGCGATGGGCACTCTGGGCGCATCTTTCGCTCAATACCCACTTCTGATTCTGAC
GAAGTCATGGGGTTGGCGCGTCCCTTTGCTGGTTTGTACAGGGGCGGGTCTGGTCATCGCTCTCATGCTGTGGAAACTCC
TACCCAAACGCCCCAATTGGTTCGTGGAGTTGATGCGAGAAGACGGGTTTGATCCAAAGAGTCCCCAGCCACTCGCGAGT
CTGATCAAGGAAATCATGCGCGACCGGAATATCTGGTGTCTTTCTCTCGCAGCAGCAGGTTTATATCTCCCGATCTCAGT
GATTGGCGATCTTTGGGGAGTGACCTTCCTGCACATCCACTCAGGTTTGTCGACAGGGCTGTCGAGTTTGCTCACCACTC
TCATCTTCATTGGTTTCGCCGCCGGAGGAATTGCAACTGGGCACTTATCCGATCACTTGAAGCGCCGCAAGATTCTTTTT
GTCACTGGAGCAATCTTGTCGTCCGTGATCGCCGTTGCGATTGCCTTGACGAACTCAGCCCCGCTTTGGTGGAACGCGAT
GTTGATGATCGCGCTCGGATTGACAACAGGTTCCCAGCTACTGGCTTTCGTGATGACGGCCGACGTGGCAAAACGTCATA
ACCGTGCAGTCAAACTAGCTTTCGTGAACTTCGTTGTCATGGTGCTGCCAGTATTCATTCAGCCCGCTGTTGGCTTCCTT
GCTCAAATAGGGGTTGCTAAGGGCTTGGTGCCATCTCCGGGCCAGGAGCTCCAAGGCTATGGTCTCGTTGTCGTCCTGAT
GTTCATATCAACAGGGCTCTCCCTCTGCGTGAAAGATACGAAACCGCGCAAGGAGAAATTTGTCATCGCCCACTAA

Upstream 100 bases:

>100_bases
CTGCGTGAAGCAGCACTAACACTCGGCTATGTGAGCAAAGAAGACTTCGATCGCATTGTTAATCCGGCATTGATGACATC
TGCTCGGCTGTGACCCCCCG

Downstream 100 bases:

>100_bases
CCAACCAGAACTCGCCTGATCAAGCCACCCGCTCTGTAGCAGGATTGAGTTCTTCGTCAACTGCAGCCGCATCTAACAGA
TCCTCTGCCTCACACACAGG

Product: multidrug ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MTSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGVLQPELMRVTGSSQGEFGLAM
GMYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLLFASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKR
HGMVPGLTVAMGTLGASFAQYPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLAS
LIKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFAAGGIATGHLSDHLKRRKILF
VTGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQLLAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFL
AQIGVAKGLVPSPGQELQGYGLVVVLMFISTGLSLCVKDTKPRKEKFVIAH

Sequences:

>Translated_451_residues
MTSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGVLQPELMRVTGSSQGEFGLAM
GMYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLLFASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKR
HGMVPGLTVAMGTLGASFAQYPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLAS
LIKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFAAGGIATGHLSDHLKRRKILF
VTGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQLLAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFL
AQIGVAKGLVPSPGQELQGYGLVVVLMFISTGLSLCVKDTKPRKEKFVIAH
>Mature_450_residues
TSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGVLQPELMRVTGSSQGEFGLAMG
MYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLLFASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKRH
GMVPGLTVAMGTLGASFAQYPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLASL
IKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFAAGGIATGHLSDHLKRRKILFV
TGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQLLAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFLA
QIGVAKGLVPSPGQELQGYGLVVVLMFISTGLSLCVKDTKPRKEKFVIAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48906; Mature: 48775

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LQPELMRVTGSSQGEFGLAMGMYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLL
CCCHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKRHGMVPGLTVAMGTLGASFAQ
HCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH
YPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLAS
CCEEEEECCCCCCCCHHEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHH
LIKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFA
HHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGIATGHLSDHLKRRKILFVTGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQL
HCCCEEHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
LAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFLAQIGVAKGLVPSPGQELQGY
HHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC
GLVVVLMFISTGLSLCVKDTKPRKEKFVIAH
HHHHHHHHHHCCHHEEECCCCCCCCCEEECC
>Mature Secondary Structure 
TSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LQPELMRVTGSSQGEFGLAMGMYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLL
CCCHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKRHGMVPGLTVAMGTLGASFAQ
HCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH
YPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLAS
CCEEEEECCCCCCCCHHEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHH
LIKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFA
HHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGIATGHLSDHLKRRKILFVTGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQL
HCCCEEHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
LAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFLAQIGVAKGLVPSPGQELQGY
HHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC
GLVVVLMFISTGLSLCVKDTKPRKEKFVIAH
HHHHHHHHHHCCHHEEECCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]