Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is yybO [H]
Identifier: 124022171
GI number: 124022171
Start: 463539
End: 464894
Strand: Reverse
Name: yybO [H]
Synonym: P9303_04611
Alternate gene names: 124022171
Gene position: 464894-463539 (Counterclockwise)
Preceding gene: 124022172
Following gene: 124022169
Centisome position: 17.33
GC content: 54.57
Gene sequence:
>1356_bases ATGACATCAAATCCTGGCGAATCAAGAAGCATCCAGAGCCAGAGTTCCGCACAGCAACGAATCAGCAATCTTCATGGTCA AGCCCAGCGCGCCCGCCGGGGTTGGCGACCCTGGATTCTCTTTCTAGTTTGCTCCCTTTTCTATTTCTACGAGTTCTTCG CACGAGTGGCCCCGGGCGTCCTACAACCCGAATTGATGCGGGTCACCGGCTCGAGCCAAGGAGAGTTTGGCCTCGCCATG GGAATGTATTTTCTCGCATACGCTCCCTCACAGCTTCTTGTAGGCCGCCTTCTCGATCGCTTCGGAGTCCGTGCCGTCGT TGCCCCAGCGGCACTTGTCGTAGCCCTGGGTTGTCTGCTCTTTGCCAGCACCAACAATGTGGTGGTGCTTGGACTAGGGC GCTTGATGCAGGGATTGGGCAGTTCAGTTGCTTATCTCGGCGTCATCTATCTCGCCATGATCTGGTTCCCGCCAAAACGC CATGGGATGGTCCCGGGTTTAACCGTAGCGATGGGCACTCTGGGCGCATCTTTCGCTCAATACCCACTTCTGATTCTGAC GAAGTCATGGGGTTGGCGCGTCCCTTTGCTGGTTTGTACAGGGGCGGGTCTGGTCATCGCTCTCATGCTGTGGAAACTCC TACCCAAACGCCCCAATTGGTTCGTGGAGTTGATGCGAGAAGACGGGTTTGATCCAAAGAGTCCCCAGCCACTCGCGAGT CTGATCAAGGAAATCATGCGCGACCGGAATATCTGGTGTCTTTCTCTCGCAGCAGCAGGTTTATATCTCCCGATCTCAGT GATTGGCGATCTTTGGGGAGTGACCTTCCTGCACATCCACTCAGGTTTGTCGACAGGGCTGTCGAGTTTGCTCACCACTC TCATCTTCATTGGTTTCGCCGCCGGAGGAATTGCAACTGGGCACTTATCCGATCACTTGAAGCGCCGCAAGATTCTTTTT GTCACTGGAGCAATCTTGTCGTCCGTGATCGCCGTTGCGATTGCCTTGACGAACTCAGCCCCGCTTTGGTGGAACGCGAT GTTGATGATCGCGCTCGGATTGACAACAGGTTCCCAGCTACTGGCTTTCGTGATGACGGCCGACGTGGCAAAACGTCATA ACCGTGCAGTCAAACTAGCTTTCGTGAACTTCGTTGTCATGGTGCTGCCAGTATTCATTCAGCCCGCTGTTGGCTTCCTT GCTCAAATAGGGGTTGCTAAGGGCTTGGTGCCATCTCCGGGCCAGGAGCTCCAAGGCTATGGTCTCGTTGTCGTCCTGAT GTTCATATCAACAGGGCTCTCCCTCTGCGTGAAAGATACGAAACCGCGCAAGGAGAAATTTGTCATCGCCCACTAA
Upstream 100 bases:
>100_bases CTGCGTGAAGCAGCACTAACACTCGGCTATGTGAGCAAAGAAGACTTCGATCGCATTGTTAATCCGGCATTGATGACATC TGCTCGGCTGTGACCCCCCG
Downstream 100 bases:
>100_bases CCAACCAGAACTCGCCTGATCAAGCCACCCGCTCTGTAGCAGGATTGAGTTCTTCGTCAACTGCAGCCGCATCTAACAGA TCCTCTGCCTCACACACAGG
Product: multidrug ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGVLQPELMRVTGSSQGEFGLAM GMYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLLFASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKR HGMVPGLTVAMGTLGASFAQYPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLAS LIKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFAAGGIATGHLSDHLKRRKILF VTGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQLLAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFL AQIGVAKGLVPSPGQELQGYGLVVVLMFISTGLSLCVKDTKPRKEKFVIAH
Sequences:
>Translated_451_residues MTSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGVLQPELMRVTGSSQGEFGLAM GMYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLLFASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKR HGMVPGLTVAMGTLGASFAQYPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLAS LIKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFAAGGIATGHLSDHLKRRKILF VTGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQLLAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFL AQIGVAKGLVPSPGQELQGYGLVVVLMFISTGLSLCVKDTKPRKEKFVIAH >Mature_450_residues TSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGVLQPELMRVTGSSQGEFGLAMG MYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLLFASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKRH GMVPGLTVAMGTLGASFAQYPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLASL IKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFAAGGIATGHLSDHLKRRKILFV TGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQLLAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFLA QIGVAKGLVPSPGQELQGYGLVVVLMFISTGLSLCVKDTKPRKEKFVIAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48906; Mature: 48775
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC LQPELMRVTGSSQGEFGLAMGMYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLL CCCHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKRHGMVPGLTVAMGTLGASFAQ HCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH YPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLAS CCEEEEECCCCCCCCHHEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHH LIKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFA HHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGIATGHLSDHLKRRKILFVTGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQL HCCCEEHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH LAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFLAQIGVAKGLVPSPGQELQGY HHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC GLVVVLMFISTGLSLCVKDTKPRKEKFVIAH HHHHHHHHHHCCHHEEECCCCCCCCCEEECC >Mature Secondary Structure TSNPGESRSIQSQSSAQQRISNLHGQAQRARRGWRPWILFLVCSLFYFYEFFARVAPGV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC LQPELMRVTGSSQGEFGLAMGMYFLAYAPSQLLVGRLLDRFGVRAVVAPAALVVALGCLL CCCHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH FASTNNVVVLGLGRLMQGLGSSVAYLGVIYLAMIWFPPKRHGMVPGLTVAMGTLGASFAQ HCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHH YPLLILTKSWGWRVPLLVCTGAGLVIALMLWKLLPKRPNWFVELMREDGFDPKSPQPLAS CCEEEEECCCCCCCCHHEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHH LIKEIMRDRNIWCLSLAAAGLYLPISVIGDLWGVTFLHIHSGLSTGLSSLLTTLIFIGFA HHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGIATGHLSDHLKRRKILFVTGAILSSVIAVAIALTNSAPLWWNAMLMIALGLTTGSQL HCCCEEHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH LAFVMTADVAKRHNRAVKLAFVNFVVMVLPVFIQPAVGFLAQIGVAKGLVPSPGQELQGY HHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC GLVVVLMFISTGLSLCVKDTKPRKEKFVIAH HHHHHHHHHHCCHHEEECCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]