Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022128
Identifier: 124022128
GI number: 124022128
Start: 418387
End: 418860
Strand: Reverse
Name: 124022128
Synonym: P9303_04181
Alternate gene names: NA
Gene position: 418860-418387 (Counterclockwise)
Preceding gene: 124022129
Following gene: 124022126
Centisome position: 15.61
GC content: 48.52
Gene sequence:
>474_bases ATGAATCAATCACGCTTTGTGGTCGTTGGCCTGGTAATGGCCTCAGTGCTTACCCCTCAGTCAGCCATCGCCAAATGTGA ATTCCTAATGCCTATTGGCGGTGATGGCAACAAGATCGTCAAAAAAAGAGTAGAGCGTCCAAAGGGGTTGATGGGAAGTG CCTTTGGCCGCACAAACTGGAATACAGACTTTGCTGTTAATCAGCCCTATCGCAATTACAAACTATTCTTCACTGCAGAT TCAACCGATTCCGCCAGCTACCCAATTCAGGCCTTCCTCAAGTTCAGCGATGGCAGCAACCTACAAGTCGTCAACGAATC CATGCGGCCACCAATGGGTACCGGCAAGATGTTTGGTCCTATCCAAGCAATTCCTGGCAAAGCGGTAAGCCAAGTGAATT TCAAGGTAGGAACAGCAAAGGATCCAGGATCCACAGGATTCAGTTACAGAATTTCTGTTCAGGGCTGCCGGTAA
Upstream 100 bases:
>100_bases CCTGCGGGTCTTTAACTGCGTGATCAGAGCTAACTAGAATTACAATTGCGCTGCAAAATTCTAATTCCGCCATCATTATG GATGTGAATATTCCTTTCCT
Downstream 100 bases:
>100_bases TCGATTCTAAACATTAGGAATTGACAAGAGAATCGGGGAGGGTCAAATTGCACCTTCACCCGATTCTTGATTGATTCCTA TCAGAGGATTCATCGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNQSRFVVVGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLMGSAFGRTNWNTDFAVNQPYRNYKLFFTAD STDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGPIQAIPGKAVSQVNFKVGTAKDPGSTGFSYRISVQGCR
Sequences:
>Translated_157_residues MNQSRFVVVGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLMGSAFGRTNWNTDFAVNQPYRNYKLFFTAD STDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGPIQAIPGKAVSQVNFKVGTAKDPGSTGFSYRISVQGCR >Mature_157_residues MNQSRFVVVGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLMGSAFGRTNWNTDFAVNQPYRNYKLFFTAD STDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGPIQAIPGKAVSQVNFKVGTAKDPGSTGFSYRISVQGCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17056; Mature: 17056
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSRFVVVGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLMGSAFGRTNW CCCCCEEHHHHHHHHHCCCHHHHCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCC NTDFAVNQPYRNYKLFFTADSTDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGP CCCEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC IQAIPGKAVSQVNFKVGTAKDPGSTGFSYRISVQGCR CCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MNQSRFVVVGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLMGSAFGRTNW CCCCCEEHHHHHHHHHCCCHHHHCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCC NTDFAVNQPYRNYKLFFTADSTDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGP CCCEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC IQAIPGKAVSQVNFKVGTAKDPGSTGFSYRISVQGCR CCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA