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The map label for this gene is rimP

Identifier: 124022126

GI number: 124022126

Start: 416509

End: 416973

Strand: Reverse

Name: rimP

Synonym: P9303_04161

Alternate gene names: 124022126

Gene position: 416973-416509 (Counterclockwise)

Preceding gene: 124022128

Following gene: 124022125

Centisome position: 15.54

GC content: 52.69

Gene sequence:

>465_bases
TTGCCTCATCCTCTGCTCCCGGACCTGGAAACCCTCGCCTCGGCGACGGCTACAGGAAAAGGCTACAAACTTTGCTGTGT
ACAGGTATTCACCCATCTGATTCCTATGACCATCCAGGTGCAGATCCGTCGCAAGGATGGCAGTGATGTCTCCCTCGACG
ACTGTGCTCATTTCAGCGCTTCTATGGATGAAGCCCTGGAGGCTTCCCAACTTTTTACTGAAGCGTATGTTCTGGAAATC
AGCAGCCCAGGGATCGGAGATCAGCTCCACAGTGATCAGGACTTCCTGACTTTCAGAGGCTTCCCTGTGGAGATTAGCTT
CCGTGACGACGATTCAGACCTTCATCAAGCCGGTCTCTTGCACAAACGATCCGACGAACATGTGCACATCAACATCAAGG
GACGCATTCAACGCATACCACGTAAGGCTGTGACCTGCGTTCGCCTTACAAACCCCACGGGATAA

Upstream 100 bases:

>100_bases
CCATCACCTAGATTGTCTTGATGCCTGGCGGGTACCTCCTTCGGGAGGCAGGTCACTTCTGAAGCCGGTCGGGCCAGAAG
TTCAACCTTACCCCCTGCTT

Downstream 100 bases:

>100_bases
ATCACCTTAACGATCAGCTCAGCTTCAGCACCTTTCCACTCTTTCCATCGTCGATGGCTCTCGTTCTACTCCCCGGCCTC
AACAACCTGATCGAAGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPHPLLPDLETLASATATGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDEALEASQLFTEAYVLEI
SSPGIGDQLHSDQDFLTFRGFPVEISFRDDDSDLHQAGLLHKRSDEHVHINIKGRIQRIPRKAVTCVRLTNPTG

Sequences:

>Translated_154_residues
MPHPLLPDLETLASATATGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDEALEASQLFTEAYVLEI
SSPGIGDQLHSDQDFLTFRGFPVEISFRDDDSDLHQAGLLHKRSDEHVHINIKGRIQRIPRKAVTCVRLTNPTG
>Mature_153_residues
PHPLLPDLETLASATATGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDEALEASQLFTEAYVLEIS
SPGIGDQLHSDQDFLTFRGFPVEISFRDDDSDLHQAGLLHKRSDEHVHINIKGRIQRIPRKAVTCVRLTNPTG

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_PROM3 (A2C6Q8)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001016433.1
- ProteinModelPortal:   A2C6Q8
- STRING:   A2C6Q8
- GeneID:   4778392
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_04161
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   AYVLEIS
- ProtClustDB:   PRK14634
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17113; Mature: 16981

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPLLPDLETLASATATGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSA
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHCC
SMDEALEASQLFTEAYVLEISSPGIGDQLHSDQDFLTFRGFPVEISFRDDDSDLHQAGLL
CHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHCCC
HKRSDEHVHINIKGRIQRIPRKAVTCVRLTNPTG
CCCCCCEEEEEEEHHEHHCCHHHEEEEEECCCCC
>Mature Secondary Structure 
PHPLLPDLETLASATATGKGYKLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSA
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHCC
SMDEALEASQLFTEAYVLEISSPGIGDQLHSDQDFLTFRGFPVEISFRDDDSDLHQAGLL
CHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHCCC
HKRSDEHVHINIKGRIQRIPRKAVTCVRLTNPTG
CCCCCCEEEEEEEHHEHHCCHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA