Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022120
Identifier: 124022120
GI number: 124022120
Start: 407639
End: 408826
Strand: Reverse
Name: 124022120
Synonym: P9303_04101
Alternate gene names: NA
Gene position: 408826-407639 (Counterclockwise)
Preceding gene: 124022122
Following gene: 124022116
Centisome position: 15.24
GC content: 51.94
Gene sequence:
>1188_bases ATGGAATCCACTCGCCTGAAGCGAATGCACGACAGTTACAAAGCGGACGCCCAACTCGATGAAGTGTTTGTCGTCCTGAC GATCGGCGCCAGCATGATTGCCACCCTGGGCCTGCAGGCCAACAGTGCTGCGGTGGTGATTGGAGCGATGGTTGTCGCCC CATGGATCGAGCCCCTACGAGCAAGTGCCTTCGCCGTGTTAATTGGCGACATAAGACTGTTGATGGATGCCCTCCTAAGC CTCTTCGTAGGAGTGTTCATTACCATCTTGCTCTCCGCCTTGCTGGGAGAAGTCGCGAACCTCCCCAAATTGGGTTCGGA AGTCATGGACCGCACGAGTCCAAACCTGCTCGATCTAGGCATCGCCTTAGTCGCAGGTGCAATGGCCATATACGCAAAGT TGCGCAGAGACGCCGTGAGTTCCCTCGCAGGCACAGCCATTGCCGTGGCTCTCGTTCCACCGGTCTGTGTGATGGGTCTA TTAATTTCTGATCAAAACTGGGCCGATGCCTTTGGGGCCGGATTGCTATTCGCTACCAACCTGCTCGGCATTCTTAGCGG TGGGCTTGTGATGATGGCCTGGAAAGAGCCCTCCTTTCTTCAGCGACTGCGAGAAAACAATCTCAGCGCGGCCAAATTTT TAGTGACGTTTGGCCTAACAGCACTACTGCTGATCCCCCTAACCAAACAGTTTGTGAGCCTTGTTGGCGAAAAGAATAGG GAGGAGACGCGCGACGAGATTCAACGCACGATTAAAACCTTCCTGAAGCGAGAGACTCTGACCTTCGGTGGCAAGGAGGC GAAGGCAAAAGTGGCAAACCTTGAGATCGCCTGGGACAAGAACCCACCAGAGATTCTTCTTTTGGTACTGGTCACCAATC CTGCACAGCCCAGCCTCAAGCAGGTCTCAGCTGTACAGAAAGAAATCAACAAACGCCAAGAGCTGGATTACCAACTCATT GTTCAACGCGTTGTTGTTGTAGAAGGTCCTCCAGAGGAACCCAATCTGATCAAAGGGGAAGAAGGGAAACTGATCAAAGA TCCCACTCCAGAAGTCACCACAAATACCATTAAAGACACAGAAGAACAGTTTCAAATTCAAGAACTAGGCATAGATCAAG AGAACAAAGATATGCAACAAAGAGCTCATGAGGCGACAACTCAACCAGCAGAGGCCAAGACTCCCTGA
Upstream 100 bases:
>100_bases TCTGCATAAGTATTACAAGATCTCCTCCAATTACAGCTTTAAACATCTGGGACAATAGTCCAACAAACTAGAAGTTCACC TAGGCGAGGTCATTAGAGGC
Downstream 100 bases:
>100_bases AGACCTAAGACTTTGCCTTTGAAGCTGATGCGAACATTGTTGTTTTGATTATTTCAGCAGCTCTCTGAGTTAACTGATCT GAGCTGATACAACAGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MESTRLKRMHDSYKADAQLDEVFVVLTIGASMIATLGLQANSAAVVIGAMVVAPWIEPLRASAFAVLIGDIRLLMDALLS LFVGVFITILLSALLGEVANLPKLGSEVMDRTSPNLLDLGIALVAGAMAIYAKLRRDAVSSLAGTAIAVALVPPVCVMGL LISDQNWADAFGAGLLFATNLLGILSGGLVMMAWKEPSFLQRLRENNLSAAKFLVTFGLTALLLIPLTKQFVSLVGEKNR EETRDEIQRTIKTFLKRETLTFGGKEAKAKVANLEIAWDKNPPEILLLVLVTNPAQPSLKQVSAVQKEINKRQELDYQLI VQRVVVVEGPPEEPNLIKGEEGKLIKDPTPEVTTNTIKDTEEQFQIQELGIDQENKDMQQRAHEATTQPAEAKTP
Sequences:
>Translated_395_residues MESTRLKRMHDSYKADAQLDEVFVVLTIGASMIATLGLQANSAAVVIGAMVVAPWIEPLRASAFAVLIGDIRLLMDALLS LFVGVFITILLSALLGEVANLPKLGSEVMDRTSPNLLDLGIALVAGAMAIYAKLRRDAVSSLAGTAIAVALVPPVCVMGL LISDQNWADAFGAGLLFATNLLGILSGGLVMMAWKEPSFLQRLRENNLSAAKFLVTFGLTALLLIPLTKQFVSLVGEKNR EETRDEIQRTIKTFLKRETLTFGGKEAKAKVANLEIAWDKNPPEILLLVLVTNPAQPSLKQVSAVQKEINKRQELDYQLI VQRVVVVEGPPEEPNLIKGEEGKLIKDPTPEVTTNTIKDTEEQFQIQELGIDQENKDMQQRAHEATTQPAEAKTP >Mature_395_residues MESTRLKRMHDSYKADAQLDEVFVVLTIGASMIATLGLQANSAAVVIGAMVVAPWIEPLRASAFAVLIGDIRLLMDALLS LFVGVFITILLSALLGEVANLPKLGSEVMDRTSPNLLDLGIALVAGAMAIYAKLRRDAVSSLAGTAIAVALVPPVCVMGL LISDQNWADAFGAGLLFATNLLGILSGGLVMMAWKEPSFLQRLRENNLSAAKFLVTFGLTALLLIPLTKQFVSLVGEKNR EETRDEIQRTIKTFLKRETLTFGGKEAKAKVANLEIAWDKNPPEILLLVLVTNPAQPSLKQVSAVQKEINKRQELDYQLI VQRVVVVEGPPEEPNLIKGEEGKLIKDPTPEVTTNTIKDTEEQFQIQELGIDQENKDMQQRAHEATTQPAEAKTP
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42983; Mature: 42983
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTRLKRMHDSYKADAQLDEVFVVLTIGASMIATLGLQANSAAVVIGAMVVAPWIEPLR CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ASAFAVLIGDIRLLMDALLSLFVGVFITILLSALLGEVANLPKLGSEVMDRTSPNLLDLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH IALVAGAMAIYAKLRRDAVSSLAGTAIAVALVPPVCVMGLLISDQNWADAFGAGLLFATN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LLGILSGGLVMMAWKEPSFLQRLRENNLSAAKFLVTFGLTALLLIPLTKQFVSLVGEKNR HHHHHCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EETRDEIQRTIKTFLKRETLTFGGKEAKAKVANLEIAWDKNPPEILLLVLVTNPAQPSLK HHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEEEEEECCCCCCEEEEEEECCCCCCHHH QVSAVQKEINKRQELDYQLIVQRVVVVEGPPEEPNLIKGEEGKLIKDPTPEVTTNTIKDT HHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCH EEQFQIQELGIDQENKDMQQRAHEATTQPAEAKTP HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MESTRLKRMHDSYKADAQLDEVFVVLTIGASMIATLGLQANSAAVVIGAMVVAPWIEPLR CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ASAFAVLIGDIRLLMDALLSLFVGVFITILLSALLGEVANLPKLGSEVMDRTSPNLLDLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH IALVAGAMAIYAKLRRDAVSSLAGTAIAVALVPPVCVMGLLISDQNWADAFGAGLLFATN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LLGILSGGLVMMAWKEPSFLQRLRENNLSAAKFLVTFGLTALLLIPLTKQFVSLVGEKNR HHHHHCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EETRDEIQRTIKTFLKRETLTFGGKEAKAKVANLEIAWDKNPPEILLLVLVTNPAQPSLK HHHHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEEEEEECCCCCCEEEEEEECCCCCCHHH QVSAVQKEINKRQELDYQLIVQRVVVVEGPPEEPNLIKGEEGKLIKDPTPEVTTNTIKDT HHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCH EEQFQIQELGIDQENKDMQQRAHEATTQPAEAKTP HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA