Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022122
Identifier: 124022122
GI number: 124022122
Start: 410477
End: 411262
Strand: Reverse
Name: 124022122
Synonym: P9303_04121
Alternate gene names: NA
Gene position: 411262-410477 (Counterclockwise)
Preceding gene: 124022123
Following gene: 124022120
Centisome position: 15.33
GC content: 56.11
Gene sequence:
>786_bases GTGATTGCCCAACGCGAACCACTGCTCTGGCTTCAGCTCATCGCTATTGGGGCGATCCCGATAGAATTGCTTTTACTGAG ACTGGTTTTAGCAGGGGCAGATTTGGGGCCTGTTCCAGTCTTCGAACGTCTACTCACCTGGGCTGTAGCGGTGTTAACGC CAACCCTCGTCCTCTGGAAACGCCCTGCCGACTGGGGATCACTACTGCTACTGCGGCGCCCACTGAGTCAACGCTCAGAG GCCCAGCGTCAGCTCAGTGGTCTTCAGCAGAGCTTGATCCCTCGGTTGAGCCTCTTGGTTGGATCAACAGCCCTACTCGC GATGTTCTGGTGGATCGATCAATCTTCCATTTTGGTGATGGACCTCTCGCCATTACAAGGCAGCTCTCGACTGGTCACAC TGCTTACAGCAGTCCCCCTACTTGCTCTCGTTCTTTGGCAGTGGCAACAGCTCACCCAAAGCCTCTGGCTTCTAACCCGC TCCGACCAGGAACTTGCCCAGGCCCCCTCTCTAAGCGAAGAACAACTTCAGCATGAACGACTTTGCTTGGGGTTGAGTCT GCTCACCATGCCGGCACTCCTAACAACATCTTCAAGTCCCGCGACGACGATCAATCCAAAGCAACCCACCAGTAAGGAGA AGCGCTCCGATCTGAATGGAGACATCGGAGAGGGGAACAATGCTCCCGGAGGAGGCACGCAAACCCATCGTCAACAGACC GATACAGGCGGAAGCGAAGAAAGCGAACCAGAACACCCGCCGGAAACCCCGCCAAGGGCTGAGTGA
Upstream 100 bases:
>100_bases GCTAACTGGGAAGAACGCGACATCATTGAAGCTCACAAACTAGTGACCAAGCGACGCACGCTGAGTAGCTCATGAGGTTT CGCCCCGCCTACAACTTGTT
Downstream 100 bases:
>100_bases CTCTTTGATCAGTCGTTCTCTTAGCTCAGGATCCAACTTTGAGCCAGGACCAGAAGAATCGCCCAACAGTTCAAAAGCGC AATGCTTGAATGTTAAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MIAQREPLLWLQLIAIGAIPIELLLLRLVLAGADLGPVPVFERLLTWAVAVLTPTLVLWKRPADWGSLLLLRRPLSQRSE AQRQLSGLQQSLIPRLSLLVGSTALLAMFWWIDQSSILVMDLSPLQGSSRLVTLLTAVPLLALVLWQWQQLTQSLWLLTR SDQELAQAPSLSEEQLQHERLCLGLSLLTMPALLTTSSSPATTINPKQPTSKEKRSDLNGDIGEGNNAPGGGTQTHRQQT DTGGSEESEPEHPPETPPRAE
Sequences:
>Translated_261_residues MIAQREPLLWLQLIAIGAIPIELLLLRLVLAGADLGPVPVFERLLTWAVAVLTPTLVLWKRPADWGSLLLLRRPLSQRSE AQRQLSGLQQSLIPRLSLLVGSTALLAMFWWIDQSSILVMDLSPLQGSSRLVTLLTAVPLLALVLWQWQQLTQSLWLLTR SDQELAQAPSLSEEQLQHERLCLGLSLLTMPALLTTSSSPATTINPKQPTSKEKRSDLNGDIGEGNNAPGGGTQTHRQQT DTGGSEESEPEHPPETPPRAE >Mature_261_residues MIAQREPLLWLQLIAIGAIPIELLLLRLVLAGADLGPVPVFERLLTWAVAVLTPTLVLWKRPADWGSLLLLRRPLSQRSE AQRQLSGLQQSLIPRLSLLVGSTALLAMFWWIDQSSILVMDLSPLQGSSRLVTLLTAVPLLALVLWQWQQLTQSLWLLTR SDQELAQAPSLSEEQLQHERLCLGLSLLTMPALLTTSSSPATTINPKQPTSKEKRSDLNGDIGEGNNAPGGGTQTHRQQT DTGGSEESEPEHPPETPPRAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28664; Mature: 28664
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAQREPLLWLQLIAIGAIPIELLLLRLVLAGADLGPVPVFERLLTWAVAVLTPTLVLWK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC RPADWGSLLLLRRPLSQRSEAQRQLSGLQQSLIPRLSLLVGSTALLAMFWWIDQSSILVM CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DLSPLQGSSRLVTLLTAVPLLALVLWQWQQLTQSLWLLTRSDQELAQAPSLSEEQLQHER ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHH LCLGLSLLTMPALLTTSSSPATTINPKQPTSKEKRSDLNGDIGEGNNAPGGGTQTHRQQT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHC DTGGSEESEPEHPPETPPRAE CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIAQREPLLWLQLIAIGAIPIELLLLRLVLAGADLGPVPVFERLLTWAVAVLTPTLVLWK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC RPADWGSLLLLRRPLSQRSEAQRQLSGLQQSLIPRLSLLVGSTALLAMFWWIDQSSILVM CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE DLSPLQGSSRLVTLLTAVPLLALVLWQWQQLTQSLWLLTRSDQELAQAPSLSEEQLQHER ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHH LCLGLSLLTMPALLTTSSSPATTINPKQPTSKEKRSDLNGDIGEGNNAPGGGTQTHRQQT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHC DTGGSEESEPEHPPETPPRAE CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA