Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022116
Identifier: 124022116
GI number: 124022116
Start: 405678
End: 406019
Strand: Reverse
Name: 124022116
Synonym: P9303_04061
Alternate gene names: NA
Gene position: 406019-405678 (Counterclockwise)
Preceding gene: 124022120
Following gene: 124022115
Centisome position: 15.13
GC content: 54.39
Gene sequence:
>342_bases ATGCCGAGAATTGCGCCTGCTCTTTTTTCCACCCTCATGATGGTGGCTGGACTAATAGCCATCACAGGATGTCGAAAAAA TCAGCCCTCATGGACGACAAACCAAGCTGAAGCGATCAATCGTCTTGAACTCAGGCTCGATCAGCTCGAGCATCGAATAG GGCAAACGACCCCCTCCGCTACCGACACCAACAGCAAGACCCCCGCCGGGCCGGTCAAGTCACTCACCTTTCGCATGGAA TCAACTGATGGCCGCCTAAGGGTTTACTGGGCCGACGGCAGTGACAGCGATCTCCTTTGCACGAAAGAACAATCGACGCG GATTCAATGGGCATGTGGCTGA
Upstream 100 bases:
>100_bases ACGCAACAGGCATGAGGCTCAAGGTGAGCTCATCAACTGGAGCCAAAGCCTGGCGCAGGCAAGCTGAACCCACTAGTAGT GGTGCACCACTCCTAATTGC
Downstream 100 bases:
>100_bases TTTCAGGCACAACCGATCACACATCTAAACCAACACTGACAAACCTTTAAATGGTTCAGGAAACAACATGCAGATGATGA GATGTTTTCCTCCCGCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPRIAPALFSTLMMVAGLIAITGCRKNQPSWTTNQAEAINRLELRLDQLEHRIGQTTPSATDTNSKTPAGPVKSLTFRME STDGRLRVYWADGSDSDLLCTKEQSTRIQWACG
Sequences:
>Translated_113_residues MPRIAPALFSTLMMVAGLIAITGCRKNQPSWTTNQAEAINRLELRLDQLEHRIGQTTPSATDTNSKTPAGPVKSLTFRME STDGRLRVYWADGSDSDLLCTKEQSTRIQWACG >Mature_112_residues PRIAPALFSTLMMVAGLIAITGCRKNQPSWTTNQAEAINRLELRLDQLEHRIGQTTPSATDTNSKTPAGPVKSLTFRMES TDGRLRVYWADGSDSDLLCTKEQSTRIQWACG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12497; Mature: 12366
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIAPALFSTLMMVAGLIAITGCRKNQPSWTTNQAEAINRLELRLDQLEHRIGQTTPSA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TDTNSKTPAGPVKSLTFRMESTDGRLRVYWADGSDSDLLCTKEQSTRIQWACG CCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCEEEEECC >Mature Secondary Structure PRIAPALFSTLMMVAGLIAITGCRKNQPSWTTNQAEAINRLELRLDQLEHRIGQTTPSA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TDTNSKTPAGPVKSLTFRMESTDGRLRVYWADGSDSDLLCTKEQSTRIQWACG CCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA