Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124021716
Identifier: 124021716
GI number: 124021716
Start: 1375
End: 2151
Strand: Direct
Name: 124021716
Synonym: P9303_00011
Alternate gene names: NA
Gene position: 1375-2151 (Clockwise)
Preceding gene: 124021715
Following gene: 124021717
Centisome position: 0.05
GC content: 47.62
Gene sequence:
>777_bases TTGAATCTTCCTGATCAGATTTTATTGAGTGATCTGTTGCATCATCGTGTACGTTGTGATCAGGGATTAGATCATGGGCC TGGAGTAATGCCTTGGATGCATCCTCCAGTTCATCGTTTACTTGGTTGGGTTAGTCGTCCATCAGCACTTCGAGTGTCGA GGGATGTTTGGCGTTTGGATCAGTCTCGTGGGATTAATGAGCAAGAGGTTTTTGTTAAAGGGGAACCGGCTGTTTCTGAT CAGATCACGCTTGAGCGTCTTCCCACTTTGTTAGATGCTGATTTGTTGGATCGCGATGGGGAACGCCTTGGTTTGGTGGC TGATTTTGTTTTTATTCCCACAACAGGCAAAATTCTTCATTATTTGGTCTCTCGCAGTGATCCTCGCCTTCCAGGCAGCA GTCGATGGCGATTAACAACTGATCGCATTGTTGATCAGCAACCAGGAATGGTTTCTACTGCTTTGCGTGGTTTAGATGAT CTTCCCTTGGTTCATTCCAGTGTTCGGCAGGGTTTAATCAAGCGTTCCCGTCATTGGCGTGATCAACTTCACAAGATGGG TGACCGGGCTAGTGATCGTTTGGAAGGTTGGTTGGAGGATCCTCCCTGGGAAGAACCAGTTCAGCGTTCTTGGAAGTCTT CTGATATGGCTGAAATGGATCCCTTAGAAGGTTGGGATGATCAACAGACTGATAATTTTTCCCAATCAACTGAAGAGTTA CGCCGCCGTCGGCGTCCGGACGGTAGAGGCGATGGTCAGGATGATCCTTGGGTTTGA
Upstream 100 bases:
>100_bases GCGTTGTAATGCTCCAACCACACCTGCAATTATTTCACCAAAGGATGATGATATTGGCTTTACGTATTTGGTGATGCCAG TACAAATTCGTTCTTGAACT
Downstream 100 bases:
>100_bases GCTTTATAAGTAAAACTGGGAAGAGATGAGTCAGATCTCGTGTGTGAGGGCCCCGATTTGAGAGTTGATTATGACGTGGC TGCGGCTTTACGTCATGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNLPDQILLSDLLHHRVRCDQGLDHGPGVMPWMHPPVHRLLGWVSRPSALRVSRDVWRLDQSRGINEQEVFVKGEPAVSD QITLERLPTLLDADLLDRDGERLGLVADFVFIPTTGKILHYLVSRSDPRLPGSSRWRLTTDRIVDQQPGMVSTALRGLDD LPLVHSSVRQGLIKRSRHWRDQLHKMGDRASDRLEGWLEDPPWEEPVQRSWKSSDMAEMDPLEGWDDQQTDNFSQSTEEL RRRRRPDGRGDGQDDPWV
Sequences:
>Translated_258_residues MNLPDQILLSDLLHHRVRCDQGLDHGPGVMPWMHPPVHRLLGWVSRPSALRVSRDVWRLDQSRGINEQEVFVKGEPAVSD QITLERLPTLLDADLLDRDGERLGLVADFVFIPTTGKILHYLVSRSDPRLPGSSRWRLTTDRIVDQQPGMVSTALRGLDD LPLVHSSVRQGLIKRSRHWRDQLHKMGDRASDRLEGWLEDPPWEEPVQRSWKSSDMAEMDPLEGWDDQQTDNFSQSTEEL RRRRRPDGRGDGQDDPWV >Mature_258_residues MNLPDQILLSDLLHHRVRCDQGLDHGPGVMPWMHPPVHRLLGWVSRPSALRVSRDVWRLDQSRGINEQEVFVKGEPAVSD QITLERLPTLLDADLLDRDGERLGLVADFVFIPTTGKILHYLVSRSDPRLPGSSRWRLTTDRIVDQQPGMVSTALRGLDD LPLVHSSVRQGLIKRSRHWRDQLHKMGDRASDRLEGWLEDPPWEEPVQRSWKSSDMAEMDPLEGWDDQQTDNFSQSTEEL RRRRRPDGRGDGQDDPWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29758; Mature: 29758
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPDQILLSDLLHHRVRCDQGLDHGPGVMPWMHPPVHRLLGWVSRPSALRVSRDVWRLD CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH QSRGINEQEVFVKGEPAVSDQITLERLPTLLDADLLDRDGERLGLVADFVFIPTTGKILH HHCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCHHHHHH YLVSRSDPRLPGSSRWRLTTDRIVDQQPGMVSTALRGLDDLPLVHSSVRQGLIKRSRHWR HHHHCCCCCCCCCCCEEEEHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DQLHKMGDRASDRLEGWLEDPPWEEPVQRSWKSSDMAEMDPLEGWDDQQTDNFSQSTEEL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RRRRRPDGRGDGQDDPWV HHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNLPDQILLSDLLHHRVRCDQGLDHGPGVMPWMHPPVHRLLGWVSRPSALRVSRDVWRLD CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH QSRGINEQEVFVKGEPAVSDQITLERLPTLLDADLLDRDGERLGLVADFVFIPTTGKILH HHCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCHHHHHH YLVSRSDPRLPGSSRWRLTTDRIVDQQPGMVSTALRGLDDLPLVHSSVRQGLIKRSRHWR HHHHCCCCCCCCCCCEEEEHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DQLHKMGDRASDRLEGWLEDPPWEEPVQRSWKSSDMAEMDPLEGWDDQQTDNFSQSTEEL HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RRRRRPDGRGDGQDDPWV HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA