Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968938
Identifier: 123968938
GI number: 123968938
Start: 1176105
End: 1177313
Strand: Reverse
Name: 123968938
Synonym: A9601_14051
Alternate gene names: NA
Gene position: 1177313-1176105 (Counterclockwise)
Preceding gene: 123968939
Following gene: 123968937
Centisome position: 70.5
GC content: 31.68
Gene sequence:
>1209_bases ATGAATCTTAAATGTAGACATTGTGGAAAAACTCTAAATCATGAAGTTATTGATTTGGGCAACCAGCCTCCAAGTAATGC ATATTTGGATAAAAATCAAATATTGAGACCTGAAATTACGTATCCCTTAAAAGTCTATGCATGTGAACATTGTTGGTTAA TTCAACTTCCTGAACATGCCACATCAGAGGAATTGTTCACGCCAGATTATGCTTATTTTTCAAGTACATCAACTAGTTGG TGTGCTCATGCTGAGAAATTTGTAAATGAAGCTGTCTCAGATCATAATCTTTCGCAAAAAAGTTTTGTTGTTGAATTAGC AAGCAACGATGGATATTTATTGCAATATTTGAAATCTAGGGGAATACCTTGTTTAGGTGTTGAACCAACTAGAGCTGCTG CTGAAATCGCAAGATCTAAGGGGATTAATACAATAGAAAGCTTCTTTGGCTTAGAAATGGCTAAGGATATGGATAAGGCA GATCTTGTTATAGCTAATAATGTTTTAGCTCATGTACCTGATATTAACGATTTCATGGGGGGTATACATGAAGTTTTAAA GCCAAAAGGAAAAGCATCAATTGAATTTCCCCACTTATTAAGAATGATAAAGGGGAAACAATTCGATACTATTTATCATG AACATTTTAGTTATCTAAGTCTTAGAACAGTTCAAAGAATAGCTTCATCTGTTGGACTGGAAATATTCAAAGTTTCCGAA TTAAGTACTCATGGAGGTAGTTTAAGGGTATGGCTTTCCAAAAAAAATAATTTTGAGATTGATTCTTCTGTTGAGAGAAT ACTAAATTTAGAGGTTCAAGAGGAATTAGAGTCTCTAAAAATTTTTGAAGAATTTCGCGCGAGCGCCTTAAAAGCTAAAT ATCAATTCTTAGATTTTCTTATAAAAGCTAAAAATAAAAATAAAAAAATAATGGCATATGGAGCCGCTGCAAAAGGTAAT ACTTTTTTAAATTTTGCTGGAATAAAATCTGATTTAATATCTTTGGTAGCAGATAAATCTATTAGTAAACAAAATAAGTT TATGCCTGGTAGTTTGATACCAATTGTTTCACCTAAAACTCTATTGAATGAGAAACCTGATTCAATAATAGTTTTACCTT GGAATATTATTTCAGAAATCAGATCTCAATTAAAAAACCATCAGCTTGTTACTGCTATTCCGAATTTAAAGGTTTGGAAT AATTTATAA
Upstream 100 bases:
>100_bases CTGGTATAAGATGGAATGATCCTCAAATAGCAATTTCATGGCCTTTGCAGGCTGTTAATTTAAGTGAAAGAGATCAAAAT TTGCCTTATTTATCTGAGAA
Downstream 100 bases:
>100_bases AATAATTTCTCTTTAAACCATATTTCAATGAATGCAATAAATGATCTTATTCCTTTAGAAGCAACTGCTAAATATGTTTC TAAAAGTCTATCAATAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Type; D-Mycarose 3-C-Methyltransferase; NDP-Hexose 3-C-Methyltransferase Protein; NDP-Hexose 3-C-Methyltransferase TylCIII; Sugar 3-C-Methyl Transferase; Methyltransferase Family Protein; C-Methyltransferase Family; C-3 Methyl Transferase; NDP-Hexose Methyltransferase Protein; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; Transferase; Aminotransferase Class-III; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Cyclopropane-Fatty-Acyl-Phospholipid Synthase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MNLKCRHCGKTLNHEVIDLGNQPPSNAYLDKNQILRPEITYPLKVYACEHCWLIQLPEHATSEELFTPDYAYFSSTSTSW CAHAEKFVNEAVSDHNLSQKSFVVELASNDGYLLQYLKSRGIPCLGVEPTRAAAEIARSKGINTIESFFGLEMAKDMDKA DLVIANNVLAHVPDINDFMGGIHEVLKPKGKASIEFPHLLRMIKGKQFDTIYHEHFSYLSLRTVQRIASSVGLEIFKVSE LSTHGGSLRVWLSKKNNFEIDSSVERILNLEVQEELESLKIFEEFRASALKAKYQFLDFLIKAKNKNKKIMAYGAAAKGN TFLNFAGIKSDLISLVADKSISKQNKFMPGSLIPIVSPKTLLNEKPDSIIVLPWNIISEIRSQLKNHQLVTAIPNLKVWN NL
Sequences:
>Translated_402_residues MNLKCRHCGKTLNHEVIDLGNQPPSNAYLDKNQILRPEITYPLKVYACEHCWLIQLPEHATSEELFTPDYAYFSSTSTSW CAHAEKFVNEAVSDHNLSQKSFVVELASNDGYLLQYLKSRGIPCLGVEPTRAAAEIARSKGINTIESFFGLEMAKDMDKA DLVIANNVLAHVPDINDFMGGIHEVLKPKGKASIEFPHLLRMIKGKQFDTIYHEHFSYLSLRTVQRIASSVGLEIFKVSE LSTHGGSLRVWLSKKNNFEIDSSVERILNLEVQEELESLKIFEEFRASALKAKYQFLDFLIKAKNKNKKIMAYGAAAKGN TFLNFAGIKSDLISLVADKSISKQNKFMPGSLIPIVSPKTLLNEKPDSIIVLPWNIISEIRSQLKNHQLVTAIPNLKVWN NL >Mature_402_residues MNLKCRHCGKTLNHEVIDLGNQPPSNAYLDKNQILRPEITYPLKVYACEHCWLIQLPEHATSEELFTPDYAYFSSTSTSW CAHAEKFVNEAVSDHNLSQKSFVVELASNDGYLLQYLKSRGIPCLGVEPTRAAAEIARSKGINTIESFFGLEMAKDMDKA DLVIANNVLAHVPDINDFMGGIHEVLKPKGKASIEFPHLLRMIKGKQFDTIYHEHFSYLSLRTVQRIASSVGLEIFKVSE LSTHGGSLRVWLSKKNNFEIDSSVERILNLEVQEELESLKIFEEFRASALKAKYQFLDFLIKAKNKNKKIMAYGAAAKGN TFLNFAGIKSDLISLVADKSISKQNKFMPGSLIPIVSPKTLLNEKPDSIIVLPWNIISEIRSQLKNHQLVTAIPNLKVWN NL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45279; Mature: 45279
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKCRHCGKTLNHEVIDLGNQPPSNAYLDKNQILRPEITYPLKVYACEHCWLIQLPEHA CCCCHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCC TSEELFTPDYAYFSSTSTSWCAHAEKFVNEAVSDHNLSQKSFVVELASNDGYLLQYLKSR CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHC GIPCLGVEPTRAAAEIARSKGINTIESFFGLEMAKDMDKADLVIANNVLAHVPDINDFMG CCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHH GIHEVLKPKGKASIEFPHLLRMIKGKQFDTIYHEHFSYLSLRTVQRIASSVGLEIFKVSE HHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE LSTHGGSLRVWLSKKNNFEIDSSVERILNLEVQEELESLKIFEEFRASALKAKYQFLDFL CCCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKAKNKNKKIMAYGAAAKGNTFLNFAGIKSDLISLVADKSISKQNKFMPGSLIPIVSPKT HHHCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCEEECCCCHH LLNEKPDSIIVLPWNIISEIRSQLKNHQLVTAIPNLKVWNNL HHCCCCCEEEEECHHHHHHHHHHHHCCEEEEECCCEECCCCC >Mature Secondary Structure MNLKCRHCGKTLNHEVIDLGNQPPSNAYLDKNQILRPEITYPLKVYACEHCWLIQLPEHA CCCCHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCC TSEELFTPDYAYFSSTSTSWCAHAEKFVNEAVSDHNLSQKSFVVELASNDGYLLQYLKSR CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHC GIPCLGVEPTRAAAEIARSKGINTIESFFGLEMAKDMDKADLVIANNVLAHVPDINDFMG CCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHH GIHEVLKPKGKASIEFPHLLRMIKGKQFDTIYHEHFSYLSLRTVQRIASSVGLEIFKVSE HHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE LSTHGGSLRVWLSKKNNFEIDSSVERILNLEVQEELESLKIFEEFRASALKAKYQFLDFL CCCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKAKNKNKKIMAYGAAAKGNTFLNFAGIKSDLISLVADKSISKQNKFMPGSLIPIVSPKT HHHCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCEEECCCCHH LLNEKPDSIIVLPWNIISEIRSQLKNHQLVTAIPNLKVWNNL HHCCCCCEEEEECHHHHHHHHHHHHCCEEEEECCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA