Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968936
Identifier: 123968936
GI number: 123968936
Start: 1173444
End: 1174250
Strand: Reverse
Name: 123968936
Synonym: A9601_14031
Alternate gene names: NA
Gene position: 1174250-1173444 (Counterclockwise)
Preceding gene: 123968937
Following gene: 123968935
Centisome position: 70.32
GC content: 25.9
Gene sequence:
>807_bases ATGAATTATAAATTCCTTATAGTTGTACCTACATTTAATTCTTATAAAATTTTATCTAAATTAATTTATTCTTTAGAAAA GCAAACTTATCCTTTTTGGAGAGTTTTATTTGTCGACGGTTTTTCAACTAAAGAACACATTAATTTTCTAAAAAAGATTT GCAAAGAAAATAATCATTTTTCATGGTCCTACCAATTAAAAACAAAACCGGGTATTTATTCAGCTATGAATTATGGTGCT ACAAAAGCAAAAAAAGATGAATGGACTTTATTTTGGGGTTCTGATGATTGGGCTTCTTCGAGTAATGTTTTCGAAAGTTT AAATAAATATATAAATAAATGTATATTTGATAAGAAATTTCCAGATCTTTTAATTAGTAATTGTACATATGTCGACAGAA ACGAAAATCCTTCAAGGAAAGGAAGATTTCTAAAAAAAAAGGATAATGTAATTAATCATTTTAATTCTAAAGAGTTTAGA AAAGCATTATTCAAAGGTTATATTCCTTCTCATCAGGCAACAATCTTTTCTAAAAAAAGTTTATGTTTCGAACCACTATA TGATTCTCAATATGAATTAACCGCTGATTTGGATTTTTTTCTGAGGTTTAGTAATAAAAGTGATTTAAATGTGACTTATA TTGATTATGAAGCAGTATATTTGGCAAAAGGTGGCATAAGTGGACGCAAACCTCTAAAAAGAATAAATGAAGTATTTAAA TCCTATAAACTTAACTATCCCTTTTTGTATTTATTGCCAATTTTTACTCGATATTTTCGGAAAATATTATCTTCCATAAT AAAATAA
Upstream 100 bases:
>100_bases TTACATTTTTGAAGAAAATTGAATTATAACTGTTTATGCTATTTGTATTCCGAAATTTAAATATATAATGTAGATAGTTT CAAGGGGAAATAGGATTTAT
Downstream 100 bases:
>100_bases AATTATGTTTGAGTTACACTTATTTGGAGCTTCTTCACCTACTGGAAAAAGCCTAGCTCAAAAAATTAAAAAAAATAAAT TATTGAAACTTATTGGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNYKFLIVVPTFNSYKILSKLIYSLEKQTYPFWRVLFVDGFSTKEHINFLKKICKENNHFSWSYQLKTKPGIYSAMNYGA TKAKKDEWTLFWGSDDWASSSNVFESLNKYINKCIFDKKFPDLLISNCTYVDRNENPSRKGRFLKKKDNVINHFNSKEFR KALFKGYIPSHQATIFSKKSLCFEPLYDSQYELTADLDFFLRFSNKSDLNVTYIDYEAVYLAKGGISGRKPLKRINEVFK SYKLNYPFLYLLPIFTRYFRKILSSIIK
Sequences:
>Translated_268_residues MNYKFLIVVPTFNSYKILSKLIYSLEKQTYPFWRVLFVDGFSTKEHINFLKKICKENNHFSWSYQLKTKPGIYSAMNYGA TKAKKDEWTLFWGSDDWASSSNVFESLNKYINKCIFDKKFPDLLISNCTYVDRNENPSRKGRFLKKKDNVINHFNSKEFR KALFKGYIPSHQATIFSKKSLCFEPLYDSQYELTADLDFFLRFSNKSDLNVTYIDYEAVYLAKGGISGRKPLKRINEVFK SYKLNYPFLYLLPIFTRYFRKILSSIIK >Mature_268_residues MNYKFLIVVPTFNSYKILSKLIYSLEKQTYPFWRVLFVDGFSTKEHINFLKKICKENNHFSWSYQLKTKPGIYSAMNYGA TKAKKDEWTLFWGSDDWASSSNVFESLNKYINKCIFDKKFPDLLISNCTYVDRNENPSRKGRFLKKKDNVINHFNSKEFR KALFKGYIPSHQATIFSKKSLCFEPLYDSQYELTADLDFFLRFSNKSDLNVTYIDYEAVYLAKGGISGRKPLKRINEVFK SYKLNYPFLYLLPIFTRYFRKILSSIIK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31819; Mature: 31819
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKFLIVVPTFNSYKILSKLIYSLEKQTYPFWRVLFVDGFSTKEHINFLKKICKENNHF CCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCE SWSYQLKTKPGIYSAMNYGATKAKKDEWTLFWGSDDWASSSNVFESLNKYINKCIFDKKF EEEEEECCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC PDLLISNCTYVDRNENPSRKGRFLKKKDNVINHFNSKEFRKALFKGYIPSHQATIFSKKS HHHHHHCCEEECCCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCC LCFEPLYDSQYELTADLDFFLRFSNKSDLNVTYIDYEAVYLAKGGISGRKPLKRINEVFK CEECCCCCCCEEEEECEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHH SYKLNYPFLYLLPIFTRYFRKILSSIIK HHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNYKFLIVVPTFNSYKILSKLIYSLEKQTYPFWRVLFVDGFSTKEHINFLKKICKENNHF CCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCE SWSYQLKTKPGIYSAMNYGATKAKKDEWTLFWGSDDWASSSNVFESLNKYINKCIFDKKF EEEEEECCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC PDLLISNCTYVDRNENPSRKGRFLKKKDNVINHFNSKEFRKALFKGYIPSHQATIFSKKS HHHHHHCCEEECCCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCC LCFEPLYDSQYELTADLDFFLRFSNKSDLNVTYIDYEAVYLAKGGISGRKPLKRINEVFK CEECCCCCCCEEEEECEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHH SYKLNYPFLYLLPIFTRYFRKILSSIIK HHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA