Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968935
Identifier: 123968935
GI number: 123968935
Start: 1172558
End: 1173439
Strand: Reverse
Name: 123968935
Synonym: A9601_14021
Alternate gene names: NA
Gene position: 1173439-1172558 (Counterclockwise)
Preceding gene: 123968936
Following gene: 123968930
Centisome position: 70.27
GC content: 24.38
Gene sequence:
>882_bases ATGTTTGAGTTACACTTATTTGGAGCTTCTTCACCTACTGGAAAAAGCCTAGCTCAAAAAATTAAAAAAAATAAATTATT GAAACTTATTGGTTACTCAAGGTCAAATCCTTCTTATAAATTTATTGATTTAAGTAAAAAAAATAATGTTATTTCTAATT CAAATTCGCCGTTTATTATTGTTTCCCTTGCACCAATTTGGTTATTTGCAGATTTCTTTGCTTTTATATCAAAAGAAAAT AAAACCTTTTTAAAAAATTTAAAAGGTTTAATAATTTGTTCATCATCTTCGGTTATTACAAAAAGATTCGCTAATAATGA GTTTGATAAAAAATTAGTCTCATTATTATTATTAAGTGAGAATAAAATTGTTAATGAAGCCAAAAAAAATAAAATACCTA TAAGACTTATTAGACCGACTTTGATTTATGGAGATTATCTTAATTATGAAGATAAAAATATAAGTAATATCTTAAAGGCA ATGACTATTTTACCACTGATTCCATTACCTTCTAAATCTGGCTTAAGACAGCCTATTCATACAAGTCAGCTTTCTGAATA TATTATAAAAATTTCTCAATTTTTACTTAAAGGATCAAACGAAAATAAGGCTAAAGAGATAATTAATCTAGGTGGAGATG AAGAAATAAGTTACTTTGAAATGCTCATCGCAATTAAAAAATCTTTACCCAAAAAACATAAGGCTAAAAAATGTATAATT TTAGAAATCCCATCAAAGTTTTTTTATTTTATATTTTCTCCACTTCTGATATTTAATAATAAATTTTTTGGTGCAATTTT AAGAATCGGATCTAATTTATCAGGTTTCGAAAAAGTATATAAATTAAGTAAAACAAAACCTAAAAAATTTCCCATTAGTT AA
Upstream 100 bases:
>100_bases GTATTTAAATCCTATAAACTTAACTATCCCTTTTTGTATTTATTGCCAATTTTTACTCGATATTTTCGGAAAATATTATC TTCCATAATAAAATAAAATT
Downstream 100 bases:
>100_bases ATTTATTTCTTTTCTAAAAGTAAGGATTTAGGTTCAAAAAAATTATCAAGTTTCGTTAATGAAATTGATCCATCCAATCA TATCTATCTTAAGTATCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MFELHLFGASSPTGKSLAQKIKKNKLLKLIGYSRSNPSYKFIDLSKKNNVISNSNSPFIIVSLAPIWLFADFFAFISKEN KTFLKNLKGLIICSSSSVITKRFANNEFDKKLVSLLLLSENKIVNEAKKNKIPIRLIRPTLIYGDYLNYEDKNISNILKA MTILPLIPLPSKSGLRQPIHTSQLSEYIIKISQFLLKGSNENKAKEIINLGGDEEISYFEMLIAIKKSLPKKHKAKKCII LEIPSKFFYFIFSPLLIFNNKFFGAILRIGSNLSGFEKVYKLSKTKPKKFPIS
Sequences:
>Translated_293_residues MFELHLFGASSPTGKSLAQKIKKNKLLKLIGYSRSNPSYKFIDLSKKNNVISNSNSPFIIVSLAPIWLFADFFAFISKEN KTFLKNLKGLIICSSSSVITKRFANNEFDKKLVSLLLLSENKIVNEAKKNKIPIRLIRPTLIYGDYLNYEDKNISNILKA MTILPLIPLPSKSGLRQPIHTSQLSEYIIKISQFLLKGSNENKAKEIINLGGDEEISYFEMLIAIKKSLPKKHKAKKCII LEIPSKFFYFIFSPLLIFNNKFFGAILRIGSNLSGFEKVYKLSKTKPKKFPIS >Mature_293_residues MFELHLFGASSPTGKSLAQKIKKNKLLKLIGYSRSNPSYKFIDLSKKNNVISNSNSPFIIVSLAPIWLFADFFAFISKEN KTFLKNLKGLIICSSSSVITKRFANNEFDKKLVSLLLLSENKIVNEAKKNKIPIRLIRPTLIYGDYLNYEDKNISNILKA MTILPLIPLPSKSGLRQPIHTSQLSEYIIKISQFLLKGSNENKAKEIINLGGDEEISYFEMLIAIKKSLPKKHKAKKCII LEIPSKFFYFIFSPLLIFNNKFFGAILRIGSNLSGFEKVYKLSKTKPKKFPIS
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33308; Mature: 33308
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFELHLFGASSPTGKSLAQKIKKNKLLKLIGYSRSNPSYKFIDLSKKNNVISNSNSPFII CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEE VSLAPIWLFADFFAFISKENKTFLKNLKGLIICSSSSVITKRFANNEFDKKLVSLLLLSE EEHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHCC NKIVNEAKKNKIPIRLIRPTLIYGDYLNYEDKNISNILKAMTILPLIPLPSKSGLRQPIH CHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCH TSQLSEYIIKISQFLLKGSNENKAKEIINLGGDEEISYFEMLIAIKKSLPKKHKAKKCII HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEE LEIPSKFFYFIFSPLLIFNNKFFGAILRIGSNLSGFEKVYKLSKTKPKKFPIS EECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFELHLFGASSPTGKSLAQKIKKNKLLKLIGYSRSNPSYKFIDLSKKNNVISNSNSPFII CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEE VSLAPIWLFADFFAFISKENKTFLKNLKGLIICSSSSVITKRFANNEFDKKLVSLLLLSE EEHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHCC NKIVNEAKKNKIPIRLIRPTLIYGDYLNYEDKNISNILKAMTILPLIPLPSKSGLRQPIH CHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCH TSQLSEYIIKISQFLLKGSNENKAKEIINLGGDEEISYFEMLIAIKKSLPKKHKAKKCII HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEE LEIPSKFFYFIFSPLLIFNNKFFGAILRIGSNLSGFEKVYKLSKTKPKKFPIS EECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA