Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is yheT [H]
Identifier: 123968852
GI number: 123968852
Start: 1097424
End: 1098506
Strand: Reverse
Name: yheT [H]
Synonym: A9601_13191
Alternate gene names: 123968852
Gene position: 1098506-1097424 (Counterclockwise)
Preceding gene: 123968853
Following gene: 123968846
Centisome position: 65.78
GC content: 29.92
Gene sequence:
>1083_bases TTGGGGAGAAATAATAGTATATCTTTTAGTTTTTCAGATTACTTAAAAAATAAGCCATTTCGAGAAGTCTTACCTTGGAT AGGTGGCGACTTACAAACTTTGAGAGATACGTTTGTTATTGATTTTGTTAAATCAAAAAAAAATAAAAAAATATTCTTTC CGATTAATAAAATTCTTTCTAAAAAATTTGAGTCTGATTATCTTTTAGGTTTTTTAGAATTACCTGAAAACTTAAAATCA CTTAGGGGATTTGTAATCGTTACACATGGTTTAGGGGGCTCAACTAAACGGTTTGGTTTAAGAAGAATATCTAGGAAATT AACAAATAATGGTTTTGGAGTTCTCAAATTAAATCTAAGAGGATCTGGATCAGCGAGATATTTAGCTAATGGAAATTATT GTGCTAGATGCTCCAGTGATGTTATTTCAGCAGTTAATTATTTTAAAAAATTGATTAATTTAGAGTTCAAAGATCTTATG AAAAGGAATAATAATCTTCCAATTTACGGCGTTGGATTATCTTTAGGCGGAACTATTCTTTTAAATGCCTGTCTAGATTA CGATGAAAACAAAGGAGAAAAACTTTTAGATGGCCTTGCATGCGTGAGTACCCCTTTAGATTTATCTTCATGCAGTCTCT GTATTGAAAAACCTAGAAATTCTATCTACCAAAAATGGTTACTTCATCGCTTAAAAAATCAGTTATGGGAGGGATTTAAT GATGAAGGCAAACTCCTTGATAACGAGAAATTAAGAAAAAAAATTAGATCTTTAAAAAGTATTAGGGAATTTGATCAGAA ATTTACAGCTCCAAGTTGGGGATTTAATTCTTTAGAAGATTATTATGTTAAAGCTTCTCCAATATTTAGAATCCAAAACT CAATAAAAAAATTACCTCAAATGCTTTTTATTCATGCCAAGGATGATCCTTGGGTTCCATATAATGCAACTTTTAATTTA AGAGGGAAATTTATTGATAAATTTACTATTTTTATAACTGAAAAAGGAGGTCATAATGGTTTTCATTCGATTAATGGCTG CTGGTCAGACGAAGTCGTAAAGAACTGGTTTATTAGTATCTAA
Upstream 100 bases:
>100_bases ATAAAAAATGATTTATTTGATCTGCCAAATACCTCTATGGTATTTGGTGATGCAAAAAAGGTACTCAATGATTTGATTGG GGAATTAAAGGATCTTGGAG
Downstream 100 bases:
>100_bases AACTATCTAAAAATGGTGTTTTTTTGAAAATCCATTTTTCTATTGGCTTACCGTTAATAATATGTGAGGTAAAAATTTCA GAAATTTTTTCTGGAGAAAC
Product: putative hydrolase of the alpha/beta-hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MGRNNSISFSFSDYLKNKPFREVLPWIGGDLQTLRDTFVIDFVKSKKNKKIFFPINKILSKKFESDYLLGFLELPENLKS LRGFVIVTHGLGGSTKRFGLRRISRKLTNNGFGVLKLNLRGSGSARYLANGNYCARCSSDVISAVNYFKKLINLEFKDLM KRNNNLPIYGVGLSLGGTILLNACLDYDENKGEKLLDGLACVSTPLDLSSCSLCIEKPRNSIYQKWLLHRLKNQLWEGFN DEGKLLDNEKLRKKIRSLKSIREFDQKFTAPSWGFNSLEDYYVKASPIFRIQNSIKKLPQMLFIHAKDDPWVPYNATFNL RGKFIDKFTIFITEKGGHNGFHSINGCWSDEVVKNWFISI
Sequences:
>Translated_360_residues MGRNNSISFSFSDYLKNKPFREVLPWIGGDLQTLRDTFVIDFVKSKKNKKIFFPINKILSKKFESDYLLGFLELPENLKS LRGFVIVTHGLGGSTKRFGLRRISRKLTNNGFGVLKLNLRGSGSARYLANGNYCARCSSDVISAVNYFKKLINLEFKDLM KRNNNLPIYGVGLSLGGTILLNACLDYDENKGEKLLDGLACVSTPLDLSSCSLCIEKPRNSIYQKWLLHRLKNQLWEGFN DEGKLLDNEKLRKKIRSLKSIREFDQKFTAPSWGFNSLEDYYVKASPIFRIQNSIKKLPQMLFIHAKDDPWVPYNATFNL RGKFIDKFTIFITEKGGHNGFHSINGCWSDEVVKNWFISI >Mature_359_residues GRNNSISFSFSDYLKNKPFREVLPWIGGDLQTLRDTFVIDFVKSKKNKKIFFPINKILSKKFESDYLLGFLELPENLKSL RGFVIVTHGLGGSTKRFGLRRISRKLTNNGFGVLKLNLRGSGSARYLANGNYCARCSSDVISAVNYFKKLINLEFKDLMK RNNNLPIYGVGLSLGGTILLNACLDYDENKGEKLLDGLACVSTPLDLSSCSLCIEKPRNSIYQKWLLHRLKNQLWEGFND EGKLLDNEKLRKKIRSLKSIREFDQKFTAPSWGFNSLEDYYVKASPIFRIQNSIKKLPQMLFIHAKDDPWVPYNATFNLR GKFIDKFTIFITEKGGHNGFHSINGCWSDEVVKNWFISI
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=276, Percent_Identity=26.4492753623188, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI194578891, Length=293, Percent_Identity=23.5494880546075, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1789752, Length=282, Percent_Identity=28.3687943262411, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6319655, Length=300, Percent_Identity=26.3333333333333, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323866, Length=290, Percent_Identity=24.8275862068966, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI24652003, Length=321, Percent_Identity=24.6105919003115, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI281398151, Length=321, Percent_Identity=24.6105919003115, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 41276; Mature: 41145
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRNNSISFSFSDYLKNKPFREVLPWIGGDLQTLRDTFVIDFVKSKKNKKIFFPINKILS CCCCCCEEEEHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH KKFESDYLLGFLELPENLKSLRGFVIVTHGLGGSTKRFGLRRISRKLTNNGFGVLKLNLR HHCCCCCEEEHHHCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEC GSGSARYLANGNYCARCSSDVISAVNYFKKLINLEFKDLMKRNNNLPIYGVGLSLGGTIL CCCCEEEEECCCCHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCCHHH LNACLDYDENKGEKLLDGLACVSTPLDLSSCSLCIEKPRNSIYQKWLLHRLKNQLWEGFN HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DEGKLLDNEKLRKKIRSLKSIREFDQKFTAPSWGFNSLEDYYVKASPIFRIQNSIKKLPQ CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHH MLFIHAKDDPWVPYNATFNLRGKFIDKFTIFITEKGGHNGFHSINGCWSDEVVKNWFISI HEEEECCCCCCCCCCCEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure GRNNSISFSFSDYLKNKPFREVLPWIGGDLQTLRDTFVIDFVKSKKNKKIFFPINKILS CCCCCEEEEHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH KKFESDYLLGFLELPENLKSLRGFVIVTHGLGGSTKRFGLRRISRKLTNNGFGVLKLNLR HHCCCCCEEEHHHCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEC GSGSARYLANGNYCARCSSDVISAVNYFKKLINLEFKDLMKRNNNLPIYGVGLSLGGTIL CCCCEEEEECCCCHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCCHHH LNACLDYDENKGEKLLDGLACVSTPLDLSSCSLCIEKPRNSIYQKWLLHRLKNQLWEGFN HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DEGKLLDNEKLRKKIRSLKSIREFDQKFTAPSWGFNSLEDYYVKASPIFRIQNSIKKLPQ CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHH MLFIHAKDDPWVPYNATFNLRGKFIDKFTIFITEKGGHNGFHSINGCWSDEVVKNWFISI HEEEECCCCCCCCCCCEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]