Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968830

Identifier: 123968830

GI number: 123968830

Start: 1083749

End: 1084171

Strand: Reverse

Name: 123968830

Synonym: A9601_12971

Alternate gene names: NA

Gene position: 1084171-1083749 (Counterclockwise)

Preceding gene: 123968831

Following gene: 123968827

Centisome position: 64.92

GC content: 35.7

Gene sequence:

>423_bases
ATGCAAATAAAAACATTTATTCCATTTTGTTTCCTTTTTATTGGGACTTTAGCTTTACCACAACCTTCTCTTGCTGAAGA
AAAAATTGAAGTTATACCTATTATTCAAAGTTCAAAAGGACTTAGTGGTAAAAATTTTAATTATCTCGAGGGTAAGCCTG
AATTAAGACTCTTAAAAGTCAAGATTCCAGTTGGCTTGAAAACTCCAATTCATACTCATCCTTCCCCAATGTTGATTCAT
GTCACCAGAGGAAGATTAAAACATGTTAGGGGTGAAGAAATTAATTTCTTTAAAGCGGGTGATGCATTTATAGAGAGTAA
TAATGGGGGCCCCCACTATGTGAAAAATGTTGGGAAGAAGCCGGCCATACTTCATGTGGGAGTTGTATCAGTAGTTGGAA
TGCCTACGGCCATAAATGAATAA

Upstream 100 bases:

>100_bases
ATTTAAGAGAGGAAATTAAGCAATTAGAAAAGTTATATAAGAAATAAATTAGTTTATTATTTTTGCAAACTACCTATTAT
TAGTGAAACTTAAATATCTA

Downstream 100 bases:

>100_bases
AATTTTCTCTAAGTTATTCAATCTGCATTTTTAGGATTTACCTTTTACGAAGAACAACTGTAATGAGATACTCCTCCATA
GTTAAAATACTGGCTTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINE

Sequences:

>Translated_140_residues
MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINE
>Mature_140_residues
MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKVKIPVGLKTPIHTHPSPMLIH
VTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKKPAILHVGVVSVVGMPTAINE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15387; Mature: 15387

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCEEEEEE
KIPVGLKTPIHTHPSPMLIHVTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKK
EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHCCCC
PAILHVGVVSVVGMPTAINE
CCEEEEEHHHHHCCCCCCCC
>Mature Secondary Structure
MQIKTFIPFCFLFIGTLALPQPSLAEEKIEVIPIIQSSKGLSGKNFNYLEGKPELRLLKV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCEEEEEE
KIPVGLKTPIHTHPSPMLIHVTRGRLKHVRGEEINFFKAGDAFIESNNGGPHYVKNVGKK
EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCHHHHHCCCC
PAILHVGVVSVVGMPTAINE
CCEEEEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA