Definition | Prochlorococcus marinus str. AS9601, complete genome. |
---|---|
Accession | NC_008816 |
Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968791
Identifier: 123968791
GI number: 123968791
Start: 1063600
End: 1063872
Strand: Reverse
Name: 123968791
Synonym: A9601_12581
Alternate gene names: NA
Gene position: 1063872-1063600 (Counterclockwise)
Preceding gene: 123968792
Following gene: 123968788
Centisome position: 63.71
GC content: 39.93
Gene sequence:
>273_bases ATGCTTTATGTTCAGCATTGGTCATTTAAGGCCGGATTTCATCAAAAAGGTGCAGAAAAATTTCTTGGTGGTGGAGGAGA TTATCCTGGAGTTGAGATGATTGGAAGATATCATGCACCCGGTTCTTTAGAGGGATGGATAGTTTTAAAGACTGATGATC CAAAAGCAATATATCAACATGCCGCTGAATGGGGTGAATTTCTCAATTGGGAAACCACACCTGTGTTTACTGATGAAGAA GCTGGTCCAATAGTTGCTAAAGTCTACTCATAA
Upstream 100 bases:
>100_bases TTTGAAAGTCGATCTACAATAACAGGCAATTAAAACTATTTATTTTCTATAATTGTTTTTTTTGCTAGTAATAGAAAGCC AATAAAACTTAAAAAATAAA
Downstream 100 bases:
>100_bases ATCGATATTGAAAGTTGATTTAAAATAAGGGGCAATTAGCTCCTTTTTTTAATGAACACTCTGATCATCTCAACTTATAG CCGTACATTTGAAGAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MLYVQHWSFKAGFHQKGAEKFLGGGGDYPGVEMIGRYHAPGSLEGWIVLKTDDPKAIYQHAAEWGEFLNWETTPVFTDEE AGPIVAKVYS
Sequences:
>Translated_90_residues MLYVQHWSFKAGFHQKGAEKFLGGGGDYPGVEMIGRYHAPGSLEGWIVLKTDDPKAIYQHAAEWGEFLNWETTPVFTDEE AGPIVAKVYS >Mature_90_residues MLYVQHWSFKAGFHQKGAEKFLGGGGDYPGVEMIGRYHAPGSLEGWIVLKTDDPKAIYQHAAEWGEFLNWETTPVFTDEE AGPIVAKVYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10060; Mature: 10060
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYVQHWSFKAGFHQKGAEKFLGGGGDYPGVEMIGRYHAPGSLEGWIVLKTDDPKAIYQH CEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHEEEEECCCCCCCCEEEEEECCCHHHHHH AAEWGEFLNWETTPVFTDEEAGPIVAKVYS HHHHHHHCCCCCCCEEECCCCCCEEEEECC >Mature Secondary Structure MLYVQHWSFKAGFHQKGAEKFLGGGGDYPGVEMIGRYHAPGSLEGWIVLKTDDPKAIYQH CEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHEEEEECCCCCCCCEEEEEECCCHHHHHH AAEWGEFLNWETTPVFTDEEAGPIVAKVYS HHHHHHHCCCCCCCEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA