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The map label for this gene is psbF

Identifier: 123968788

GI number: 123968788

Start: 1061521

End: 1061817

Strand: Reverse

Name: psbF

Synonym: A9601_12551

Alternate gene names: NA

Gene position: 1061817-1061521 (Counterclockwise)

Preceding gene: 123968791

Following gene: 123968787

Centisome position: 63.59

GC content: 38.72

Gene sequence:

>297_bases
ATGGATTTTAGAGTCGTACTAGTTATTACACCAATAGTATTTTCATGGATATTTACAGTATTTTGGTTAGGTAGATGGGA
TGTATTTAGATTGACGCCACTTGGACTACCAAAAAAGGGAGTAGCACCTTTCAAAAACTATCAAGTATGGGATGATACTG
CACTAGTTCCTGCGACTGGCAGACCAGCAGAAGGTTATCCAGTATTTACCGTAAGAACCGCAGCAGTTAATGCCCTAGGC
ATTCCTACTGTTTTCTTCCTTGGAGCAATATTGGCAATGCAGTTTAAATCTTATTAA

Upstream 100 bases:

>100_bases
AATGTTATTAAGTGATTTTGTATAAATATAAGTTAATGATTTAATCAATTATTAATTTAAAAAGGGCACAATAATTACCA
AATTTATTATTTTTAAAGAA

Downstream 100 bases:

>100_bases
TAGGAAATTTTGATGGATATTAGATTTTTAATTGTTGGAGCACCATTTTTAATCGCATTTTTTTATACCTTATTTTGGCT
AAAAAAATGGGGTGCTTTTA

Product: cytochrome b559 subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MDFRVVLVITPIVFSWIFTVFWLGRWDVFRLTPLGLPKKGVAPFKNYQVWDDTALVPATGRPAEGYPVFTVRTAAVNALG
IPTVFFLGAILAMQFKSY

Sequences:

>Translated_98_residues
MDFRVVLVITPIVFSWIFTVFWLGRWDVFRLTPLGLPKKGVAPFKNYQVWDDTALVPATGRPAEGYPVFTVRTAAVNALG
IPTVFFLGAILAMQFKSY
>Mature_98_residues
MDFRVVLVITPIVFSWIFTVFWLGRWDVFRLTPLGLPKKGVAPFKNYQVWDDTALVPATGRPAEGYPVFTVRTAAVNALG
IPTVFFLGAILAMQFKSY

Specific function: Unknown. Resembles psbF, one of the subunits of the photosystem II reaction center. However is encodes asparagine rather than histidine at the site psbF uses to bind heme [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbE/psbF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013081 [H]

Pfam domain/function: PF00283 Cytochrom_B559 [H]

EC number: NA

Molecular weight: Translated: 11026; Mature: 11026

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRVVLVITPIVFSWIFTVFWLGRWDVFRLTPLGLPKKGVAPFKNYQVWDDTALVPATG
CCEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCCCEEECCCC
RPAEGYPVFTVRTAAVNALGIPTVFFLGAILAMQFKSY
CCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFRVVLVITPIVFSWIFTVFWLGRWDVFRLTPLGLPKKGVAPFKNYQVWDDTALVPATG
CCEEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCCCEEECCCC
RPAEGYPVFTVRTAAVNALGIPTVFFLGAILAMQFKSY
CCCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA