Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123968753
Identifier: 123968753
GI number: 123968753
Start: 1037662
End: 1038168
Strand: Reverse
Name: 123968753
Synonym: A9601_12201
Alternate gene names: NA
Gene position: 1038168-1037662 (Counterclockwise)
Preceding gene: 123968754
Following gene: 123968751
Centisome position: 62.17
GC content: 24.85
Gene sequence:
>507_bases ATGATAGAAAAATTTAAAACTCTTATTTTTGTGAAAAGTTCGTTAATTTCTCTTTATTTAGCGCTTACAATTCCTTTACC ATTTATTTCAATCGAAAAACTAAAAATCCCCTCTATTATAATTTTTATCATAGGACTTTATTTGATAATCAATATCACTA GTGATTATGTTGAAACTTGTAGTAATAAAATTTCATATAAAAGTAGCTTTATTTCTAAATTCTTAGGAAAAAAAAATTGG GAGATTTCTTGGAAAGATATTAAATTAATCAAATCTTTGCCAACCAGTCAGGGTAGTAAAGTTTATTACTTTAATACTTT TCAAGGTGAAAATTTTCTTGTCCCACAAAGAGTTGAAAACTTTGAAAAATTTTTATTAATTGTTTCCAGCAATACTGGGA TTTCTATTAATGAAATATCTTACATATCACCACTATGGACATATAAATTACTCACGTTACTATCAGTTTTTATGATTATT GGTGAACTTTTTGCTTTTCTAAATTAA
Upstream 100 bases:
>100_bases AATGCAGTTGCTTTTAGTGGATACGCATGCGCTCACAAAATAGGTGCAAAGTTAAACATAAACAGTTTTAAATTGCCCGA TTAAAAGGATTCCTTCTGAA
Downstream 100 bases:
>100_bases ATATTATCAATGCTGAATCTATAACCTTGTTGTCTAACAGTGGTTATTCCCCCACCTTCTCCCAATCCAGCTTGTTCTAA TTTTCTACGCAAAGTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIEKFKTLIFVKSSLISLYLALTIPLPFISIEKLKIPSIIIFIIGLYLIINITSDYVETCSNKISYKSSFISKFLGKKNW EISWKDIKLIKSLPTSQGSKVYYFNTFQGENFLVPQRVENFEKFLLIVSSNTGISINEISYISPLWTYKLLTLLSVFMII GELFAFLN
Sequences:
>Translated_168_residues MIEKFKTLIFVKSSLISLYLALTIPLPFISIEKLKIPSIIIFIIGLYLIINITSDYVETCSNKISYKSSFISKFLGKKNW EISWKDIKLIKSLPTSQGSKVYYFNTFQGENFLVPQRVENFEKFLLIVSSNTGISINEISYISPLWTYKLLTLLSVFMII GELFAFLN >Mature_168_residues MIEKFKTLIFVKSSLISLYLALTIPLPFISIEKLKIPSIIIFIIGLYLIINITSDYVETCSNKISYKSSFISKFLGKKNW EISWKDIKLIKSLPTSQGSKVYYFNTFQGENFLVPQRVENFEKFLLIVSSNTGISINEISYISPLWTYKLLTLLSVFMII GELFAFLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19363; Mature: 19363
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKFKTLIFVKSSLISLYLALTIPLPFISIEKLKIPSIIIFIIGLYLIINITSDYVETC CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHCCCHHHHHHHHHHHHHHHCCHHHHHHH SNKISYKSSFISKFLGKKNWEISWKDIKLIKSLPTSQGSKVYYFNTFQGENFLVPQRVEN HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHH FEKFLLIVSSNTGISINEISYISPLWTYKLLTLLSVFMIIGELFAFLN HHHEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIEKFKTLIFVKSSLISLYLALTIPLPFISIEKLKIPSIIIFIIGLYLIINITSDYVETC CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHCCCHHHHHHHHHHHHHHHCCHHHHHHH SNKISYKSSFISKFLGKKNWEISWKDIKLIKSLPTSQGSKVYYFNTFQGENFLVPQRVEN HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHH FEKFLLIVSSNTGISINEISYISPLWTYKLLTLLSVFMIIGELFAFLN HHHEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]