Definition | Prochlorococcus marinus str. AS9601, complete genome. |
---|---|
Accession | NC_008816 |
Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968751
Identifier: 123968751
GI number: 123968751
Start: 1036572
End: 1036841
Strand: Reverse
Name: 123968751
Synonym: A9601_12181
Alternate gene names: NA
Gene position: 1036841-1036572 (Counterclockwise)
Preceding gene: 123968753
Following gene: 123968746
Centisome position: 62.09
GC content: 33.33
Gene sequence:
>270_bases ATGACATCATTTGAAAACCCCAAAGCAATTCGTCATTTTCAGTCAATTTGCGATAGTTGCCAGGACTTAGTCACTCGTTT TCATACGCCATCTGATCTTAAATTATATAGTGATGGTTATCTCCAAGCATTGAGGAATTGCAGTAGTTTAGAGCAAAAGG ATCAAGAGAAATTGGAGAGATTAATTGAAAGATGGATTTTAGATCCGTCAAGTTTTATTGATCCAGATGGAGATGGAAAT AAAGGTTTTTTTGATAAAAAAAGTATTTAA
Upstream 100 bases:
>100_bases TCAGTTGATTGCATTCTTAATTACTGTTTGGCCAGGCAATTTTTGATCGTTCTTAATAAGGTATAACAAATGCAAAATAA AAATCAGAATTTATCGAATT
Downstream 100 bases:
>100_bases AATATTAATTTTTATTAACCAATACAGTATTTATACTCACTAATTATCTTAAGACGCTAGTTCAATTTCTATTTTTTCTT TAAGAGATCCAGAGTTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTSFENPKAIRHFQSICDSCQDLVTRFHTPSDLKLYSDGYLQALRNCSSLEQKDQEKLERLIERWILDPSSFIDPDGDGN KGFFDKKSI
Sequences:
>Translated_89_residues MTSFENPKAIRHFQSICDSCQDLVTRFHTPSDLKLYSDGYLQALRNCSSLEQKDQEKLERLIERWILDPSSFIDPDGDGN KGFFDKKSI >Mature_88_residues TSFENPKAIRHFQSICDSCQDLVTRFHTPSDLKLYSDGYLQALRNCSSLEQKDQEKLERLIERWILDPSSFIDPDGDGNK GFFDKKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10316; Mature: 10184
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFENPKAIRHFQSICDSCQDLVTRFHTPSDLKLYSDGYLQALRNCSSLEQKDQEKLER CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIERWILDPSSFIDPDGDGNKGFFDKKSI HHHHHCCCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSFENPKAIRHFQSICDSCQDLVTRFHTPSDLKLYSDGYLQALRNCSSLEQKDQEKLER CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIERWILDPSSFIDPDGDGNKGFFDKKSI HHHHHCCCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA