Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is yfcK [C]
Identifier: 123968203
GI number: 123968203
Start: 592741
End: 593625
Strand: Reverse
Name: yfcK [C]
Synonym: A9601_06681
Alternate gene names: 123968203
Gene position: 593625-592741 (Counterclockwise)
Preceding gene: 123968204
Following gene: 123968202
Centisome position: 35.55
GC content: 29.27
Gene sequence:
>885_bases TTGTTTGAATTAATAGAAGTTTTAACTAAAGATGGCAGTTATTCTTTAAGAAGTGAGTTTTTTCAAGAGAACTTCCATAG TTTATTGGGCGCATTGGAGGAAACAAAGTCAAAGTTTACAGCTACTTCTAATTTGCAAAGATTTAAGGGCAAATCTCTTA ATGTTTTGGATATATGTTTTGGTTTAGGATACAATTCCGCTTCTTTATTAAATGAATTAATTAAACAAAACTCATATTTA AATTTATATGCCTTGGAGATTGATAAAAATCCCCTTGAATATTCGCTTAGGAATGAATCTTTCCTTAAATTATGGGACCC AAAAGTCAAAAAAATATTTGAATCACTTTATCGAAAAGATTACTTTGAGGATCTATTTTTTAAATGCAGTATTTTATGGG GTGATGCTAGAGAAAAAATCAACATTATTCCTTCTACTATTAATTTCGATCTGATTTATTTGGATGGTTTTTCTCCTCAA AAATGCCCTCAGGTATGGACGATTGAATTTTTATCCAAAGTCACAGAAAAACTTAATCCTCATGGTTATTTAATAACTTA TTCTTCATCAGCAGCAGTAAGAAATACCTTAAGAAATCTAGGATTAGAAATTTTTACTATTAAGCCAAGTTTTAAAAACA GAACTTTTTGGAGTCAGGGAACTGTCGCAATATCAAAATTTGATAAGAATAAATTGAAACCTAATTTCAATTTTGAAAAG TTATCTTTAATGGAAGAAGAACATCTGTTAACTAAAGCTAGTATTCCATATAGAGATCAAGATTTAAACTCAAGTAAGAA CGATATAATCAGGAGAAGATTAGATGAGCAATTATTCTCAAATCTATTATCTACAAATAAATGGAGGGAGAAGTGGGGAA TGTGA
Upstream 100 bases:
>100_bases TAAAGGTACCTCAAAAATCATGAGAGCAGATGCTGCTAGCGTCTCGTATCCCACTTTTTGGGAAGACCTTGCCACACTAA CTAACTAGCCTGAAAAGTTT
Downstream 100 bases:
>100_bases CGAAGTTATCCGTTAAGAGTTAGATTTAAATTAGGATTTCAAATAAACATGTTAAGTGTTGCGATATTAGCGGCAGGCAA GGGCACTAGGATGGAAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MFELIEVLTKDGSYSLRSEFFQENFHSLLGALEETKSKFTATSNLQRFKGKSLNVLDICFGLGYNSASLLNELIKQNSYL NLYALEIDKNPLEYSLRNESFLKLWDPKVKKIFESLYRKDYFEDLFFKCSILWGDAREKINIIPSTINFDLIYLDGFSPQ KCPQVWTIEFLSKVTEKLNPHGYLITYSSSAAVRNTLRNLGLEIFTIKPSFKNRTFWSQGTVAISKFDKNKLKPNFNFEK LSLMEEEHLLTKASIPYRDQDLNSSKNDIIRRRLDEQLFSNLLSTNKWREKWGM
Sequences:
>Translated_294_residues MFELIEVLTKDGSYSLRSEFFQENFHSLLGALEETKSKFTATSNLQRFKGKSLNVLDICFGLGYNSASLLNELIKQNSYL NLYALEIDKNPLEYSLRNESFLKLWDPKVKKIFESLYRKDYFEDLFFKCSILWGDAREKINIIPSTINFDLIYLDGFSPQ KCPQVWTIEFLSKVTEKLNPHGYLITYSSSAAVRNTLRNLGLEIFTIKPSFKNRTFWSQGTVAISKFDKNKLKPNFNFEK LSLMEEEHLLTKASIPYRDQDLNSSKNDIIRRRLDEQLFSNLLSTNKWREKWGM >Mature_294_residues MFELIEVLTKDGSYSLRSEFFQENFHSLLGALEETKSKFTATSNLQRFKGKSLNVLDICFGLGYNSASLLNELIKQNSYL NLYALEIDKNPLEYSLRNESFLKLWDPKVKKIFESLYRKDYFEDLFFKCSILWGDAREKINIIPSTINFDLIYLDGFSPQ KCPQVWTIEFLSKVTEKLNPHGYLITYSSSAAVRNTLRNLGLEIFTIKPSFKNRTFWSQGTVAISKFDKNKLKPNFNFEK LSLMEEEHLLTKASIPYRDQDLNSSKNDIIRRRLDEQLFSNLLSTNKWREKWGM
Specific function: Unknown
COG id: COG4121
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008471 [H]
Pfam domain/function: PF05430 DUF752 [H]
EC number: NA
Molecular weight: Translated: 34455; Mature: 34455
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFELIEVLTKDGSYSLRSEFFQENFHSLLGALEETKSKFTATSNLQRFKGKSLNVLDICF CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLGYNSASLLNELIKQNSYLNLYALEIDKNPLEYSLRNESFLKLWDPKVKKIFESLYRKD HCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCEECCCHHHHHHHHHHHHHH YFEDLFFKCSILWGDAREKINIIPSTINFDLIYLDGFSPQKCPQVWTIEFLSKVTEKLNP HHHHHHHHEEEEECCCCCCEEEECCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC HGYLITYSSSAAVRNTLRNLGLEIFTIKPSFKNRTFWSQGTVAISKFDKNKLKPNFNFEK CEEEEEECCCHHHHHHHHHCCEEEEEECCCCCCCEECCCCCEEEEECCCCCCCCCCCHHH LSLMEEEHLLTKASIPYRDQDLNSSKNDIIRRRLDEQLFSNLLSTNKWREKWGM HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCC >Mature Secondary Structure MFELIEVLTKDGSYSLRSEFFQENFHSLLGALEETKSKFTATSNLQRFKGKSLNVLDICF CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLGYNSASLLNELIKQNSYLNLYALEIDKNPLEYSLRNESFLKLWDPKVKKIFESLYRKD HCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCCEECCCHHHHHHHHHHHHHH YFEDLFFKCSILWGDAREKINIIPSTINFDLIYLDGFSPQKCPQVWTIEFLSKVTEKLNP HHHHHHHHEEEEECCCCCCEEEECCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC HGYLITYSSSAAVRNTLRNLGLEIFTIKPSFKNRTFWSQGTVAISKFDKNKLKPNFNFEK CEEEEEECCCHHHHHHHHHCCEEEEEECCCCCCCEECCCCCEEEEECCCCCCCCCCCHHH LSLMEEEHLLTKASIPYRDQDLNSSKNDIIRRRLDEQLFSNLLSTNKWREKWGM HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]