Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is thrB [H]
Identifier: 123968186
GI number: 123968186
Start: 574196
End: 575104
Strand: Reverse
Name: thrB [H]
Synonym: A9601_06511
Alternate gene names: 123968186
Gene position: 575104-574196 (Counterclockwise)
Preceding gene: 123968187
Following gene: 123968185
Centisome position: 34.44
GC content: 40.7
Gene sequence:
>909_bases GTGCCTTCCACAACTGCCAATTTAGGGCCTGGATTCGATTGCCTTGGAGCTGCATTAGATTTATATAATGAGTTTATTTT TACAAGAATTGAAGGTGGTGGAGATAGATTTGATTTAATAATGGAAAGTACAGATGGTAATCATTTAAGAGGAGGACCTG AAAACTTAGTTTTTAGAGCAGCACAGAAAGTATGGGAAAGCGCAAATATGGATCCTTTTGCACTTGAAGCAAGAGTTAAG TTGGCAGTTCCACCTGCACGCGGACTTGGAAGTAGTGCTACAGCAATAGTGGCGGGACTAATCGGAGCAAATGCAATCAT GAACTCTCCATTGTCCAAAGAAAAACTTCTTGAACATGCCATTGATATAGAAGGTCATCCAGATAATGTCGTTCCTTCTC TCCTGGGTGGGCTTTGCTTGACAGCCAAGTCGGCTTCTCAAAGATGGAGAATTATTAGATGTGATTGGCACGATTCAATC AAAGCTGTGGTGGCAATACCAGCAATCCGTCTAAGCACAAGTGAAGCAAGAAAGGTTATGCCCAAGAATGTACCTATATC TGATGCAGTGACAAATATGGGGGCACTTACTTTGTTACTAAATGGCTTAAAAGCAGGAAATGAGGAACTTATAAAAGAAG GAATGTTTGATAAGTTACATGAACCCTACAGATGGAAGCTTATTAAAGGTGGACTAGAAGTCAAAGATGCTGCACTTAAT GCAGGTGCTTTAGGATGCGCAATTAGTGGGGCTGGACCAAGTATATTAGCTTTATGTAAAAAAGAAAATGGTAAAAACGT CAGTCAAGCCATGGTGAAAGCTTGGGAGAAGATAGGTGTAGCTAGCAGAGCACCATTCTTAAACGTACAAAAAACAGGTA GCCAATTTAGCAATATCTCCGGTAAGTAG
Upstream 100 bases:
>100_bases GTTTGGACTTTTTAGTGCAGCCTGCAGAGCAAAAATGCTTTTAAAAACTTAAAAACAAAAAATGTCTATTCCTGAAGTAG GTAAAAAAATAAGGGTAACA
Downstream 100 bases:
>100_bases TTTTACTTAGGCAACTTTAATGTTATAGTCTCAAGCTAGTACAACTTCAACTAGAATAAAAAAATTATTCATTACATAAA TGAATCTAGAATCTTTTCCT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWESANMDPFALEARVK LAVPPARGLGSSATAIVAGLIGANAIMNSPLSKEKLLEHAIDIEGHPDNVVPSLLGGLCLTAKSASQRWRIIRCDWHDSI KAVVAIPAIRLSTSEARKVMPKNVPISDAVTNMGALTLLLNGLKAGNEELIKEGMFDKLHEPYRWKLIKGGLEVKDAALN AGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEKIGVASRAPFLNVQKTGSQFSNISGK
Sequences:
>Translated_302_residues MPSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWESANMDPFALEARVK LAVPPARGLGSSATAIVAGLIGANAIMNSPLSKEKLLEHAIDIEGHPDNVVPSLLGGLCLTAKSASQRWRIIRCDWHDSI KAVVAIPAIRLSTSEARKVMPKNVPISDAVTNMGALTLLLNGLKAGNEELIKEGMFDKLHEPYRWKLIKGGLEVKDAALN AGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEKIGVASRAPFLNVQKTGSQFSNISGK >Mature_301_residues PSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGNHLRGGPENLVFRAAQKVWESANMDPFALEARVKL AVPPARGLGSSATAIVAGLIGANAIMNSPLSKEKLLEHAIDIEGHPDNVVPSLLGGLCLTAKSASQRWRIIRCDWHDSIK AVVAIPAIRLSTSEARKVMPKNVPISDAVTNMGALTLLLNGLKAGNEELIKEGMFDKLHEPYRWKLIKGGLEVKDAALNA GALGCAISGAGPSILALCKKENGKNVSQAMVKAWEKIGVASRAPFLNVQKTGSQFSNISGK
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=287, Percent_Identity=29.9651567944251, Blast_Score=107, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6321814, Length=332, Percent_Identity=31.6265060240964, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 32094; Mature: 31963
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGNHLRGGPENLVFRA CCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHH AQKVWESANMDPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIMNSPLSKEKLLEHA HHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IDIEGHPDNVVPSLLGGLCLTAKSASQRWRIIRCDWHDSIKAVVAIPAIRLSTSEARKVM HCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCEEECCHHHHHCC PKNVPISDAVTNMGALTLLLNGLKAGNEELIKEGMFDKLHEPYRWKLIKGGLEVKDAALN CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEHHHHCC AGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEKIGVASRAPFLNVQKTGSQFSNIS CCCCEEEECCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHCCCHHHCCC GK CC >Mature Secondary Structure PSTTANLGPGFDCLGAALDLYNEFIFTRIEGGGDRFDLIMESTDGNHLRGGPENLVFRA CCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHH AQKVWESANMDPFALEARVKLAVPPARGLGSSATAIVAGLIGANAIMNSPLSKEKLLEHA HHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IDIEGHPDNVVPSLLGGLCLTAKSASQRWRIIRCDWHDSIKAVVAIPAIRLSTSEARKVM HCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCEEECCHHHHHCC PKNVPISDAVTNMGALTLLLNGLKAGNEELIKEGMFDKLHEPYRWKLIKGGLEVKDAALN CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEHHHHCC AGALGCAISGAGPSILALCKKENGKNVSQAMVKAWEKIGVASRAPFLNVQKTGSQFSNIS CCCCEEEECCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHCCCHHHCCC GK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA