Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123967958

Identifier: 123967958

GI number: 123967958

Start: 362956

End: 363165

Strand: Reverse

Name: 123967958

Synonym: A9601_04211

Alternate gene names: NA

Gene position: 363165-362956 (Counterclockwise)

Preceding gene: 123967960

Following gene: 123967957

Centisome position: 21.75

GC content: 37.62

Gene sequence:

>210_bases
ATGGCTAATTCTTCATACATAACTACAGAATCAGGCGGAAGGCAAAATATTTTCCCTACTGAGCCTCGTCCTTATGTTGA
TCAATCTGTTTCTTATGATGGATATCCTCAAAACGCAGAAAAAGTTAATGGTCGTTGGGCAATGATCGGTTTAGTTGCAC
TTTTGGGAGCTTATGTAACTACAGGTCAAATAATTCCAGGTATCTTTTAA

Upstream 100 bases:

>100_bases
ATATTGCCTTAAAAGTACTGAATTACACATATTTTTAACCTTTTTCTTTACATTAGTTAATAAGAATGTTACGTTTGTTA
ACAATTAAACTATTTAACTA

Downstream 100 bases:

>100_bases
TGTCTCCTCTTTCAGGCTTTTTAGTTGTAATCGTATCCTTAACAGCTGTCCTCGTTGCTTATCTAACCAAGCAATTTCAA
AACGAAAATTTAAACTATCT

Product: high light inducible protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MANSSYITTESGGRQNIFPTEPRPYVDQSVSYDGYPQNAEKVNGRWAMIGLVALLGAYVTTGQIIPGIF

Sequences:

>Translated_69_residues
MANSSYITTESGGRQNIFPTEPRPYVDQSVSYDGYPQNAEKVNGRWAMIGLVALLGAYVTTGQIIPGIF
>Mature_68_residues
ANSSYITTESGGRQNIFPTEPRPYVDQSVSYDGYPQNAEKVNGRWAMIGLVALLGAYVTTGQIIPGIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7513; Mature: 7381

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSSYITTESGGRQNIFPTEPRPYVDQSVSYDGYPQNAEKVNGRWAMIGLVALLGAYVT
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
TGQIIPGIF
CCCCCCCCC
>Mature Secondary Structure 
ANSSYITTESGGRQNIFPTEPRPYVDQSVSYDGYPQNAEKVNGRWAMIGLVALLGAYVT
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
TGQIIPGIF
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA