Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123967957
Identifier: 123967957
GI number: 123967957
Start: 362696
End: 362956
Strand: Reverse
Name: 123967957
Synonym: A9601_04201
Alternate gene names: NA
Gene position: 362956-362696 (Counterclockwise)
Preceding gene: 123967958
Following gene: 123967956
Centisome position: 21.74
GC content: 34.48
Gene sequence:
>261_bases ATGTCTCCTCTTTCAGGCTTTTTAGTTGTAATCGTATCCTTAACAGCTGTCCTCGTTGCTTATCTAACCAAGCAATTTCA AAACGAAAATTTAAACTATCTAACTTCAAATCCAATGACAAATTCAAACCCTAAAGTAAAAACAATCGAAAAAGAAAAAG TTGTTGCAGAAACTCTTAATGGCAGATTCGCAATGCTTGGATTAATTGCTGCTGTTGGAGCTTACTTAACAACAGGCCAA ATAATTCCAGGTTTCGTTTAA
Upstream 100 bases:
>100_bases AAAACGCAGAAAAAGTTAATGGTCGTTGGGCAATGATCGGTTTAGTTGCACTTTTGGGAGCTTATGTAACTACAGGTCAA ATAATTCCAGGTATCTTTTA
Downstream 100 bases:
>100_bases ATGCTTTTACTCTCTGTACCATTTTACGATTTTCCATCTTCACCCATACTAATAATTGGCGCGATTGGGATTGTTGTAGC ATTGGCTGTATTTTTTCTAG
Product: high light inducible protein
Products: NA
Alternate protein names: High Light Inducible Protein-Like
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSPLSGFLVVIVSLTAVLVAYLTKQFQNENLNYLTSNPMTNSNPKVKTIEKEKVVAETLNGRFAMLGLIAAVGAYLTTGQ IIPGFV
Sequences:
>Translated_86_residues MSPLSGFLVVIVSLTAVLVAYLTKQFQNENLNYLTSNPMTNSNPKVKTIEKEKVVAETLNGRFAMLGLIAAVGAYLTTGQ IIPGFV >Mature_85_residues SPLSGFLVVIVSLTAVLVAYLTKQFQNENLNYLTSNPMTNSNPKVKTIEKEKVVAETLNGRFAMLGLIAAVGAYLTTGQI IPGFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9261; Mature: 9130
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLSGFLVVIVSLTAVLVAYLTKQFQNENLNYLTSNPMTNSNPKVKTIEKEKVVAETLN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHC GRFAMLGLIAAVGAYLTTGQIIPGFV CHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SPLSGFLVVIVSLTAVLVAYLTKQFQNENLNYLTSNPMTNSNPKVKTIEKEKVVAETLN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHC GRFAMLGLIAAVGAYLTTGQIIPGFV CHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA