Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123967960
Identifier: 123967960
GI number: 123967960
Start: 363566
End: 364066
Strand: Reverse
Name: 123967960
Synonym: A9601_04231
Alternate gene names: NA
Gene position: 364066-363566 (Counterclockwise)
Preceding gene: 123967961
Following gene: 123967958
Centisome position: 21.8
GC content: 35.73
Gene sequence:
>501_bases ATGGGGAAAAGAGGCAGACCAGCAAGAATAATTAGATGTGCTAAACCCGCTAAATGCCCAAAGTGCGGTAATAGGCATTT TCTAATTGTTGTTTATGGTTATCCAAGTAATGAGGTTATTGATGAAATAGATAAATACGATATTAGGGGCTGTTGTTTGC CACCCTATAAAAAAGTAAGAGACAAAAGTGGCAATTATTATCATTGTCCAGAACCAAAATATGTATGCTCCAACCAAGAT TGCAGATTAGAAGTTTTTATGAGGAAAGAGTGCGAGATAATGCCACCCATAGATGACTCATATCATTTTTATGGCAGAGA GTGGATACAGCAAGATATGGCTTTGCAGAGTCGAATGTTGCCAAGATTAAGAAGATTAGTACATGACAAATTAGGAGCTG ATAAGGCCAAAGAAGTTTTTGAAAAAGGACTTAAAACAACAAACGTCCAACAATTACATGAACTACAAAGAGAATATTTG GGGAATAAAAATAAGGATTGA
Upstream 100 bases:
>100_bases AAATGCAAGAGATAAGAAAAGAATTACGAAAGCTAGATCAAGAAACAAAAAAAGATGGTGGAGTAGTTGACTGGAATCGT ATGTTGAACGATTTTATGTG
Downstream 100 bases:
>100_bases TAAAAATTAAATTGAATTAAAGAACTTATTAAACTTTCATCCCGCCTTCACATATTCGAAATTGAATAAATACTTTTCAC CATCATCATCACTGTCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MGKRGRPARIIRCAKPAKCPKCGNRHFLIVVYGYPSNEVIDEIDKYDIRGCCLPPYKKVRDKSGNYYHCPEPKYVCSNQD CRLEVFMRKECEIMPPIDDSYHFYGREWIQQDMALQSRMLPRLRRLVHDKLGADKAKEVFEKGLKTTNVQQLHELQREYL GNKNKD
Sequences:
>Translated_166_residues MGKRGRPARIIRCAKPAKCPKCGNRHFLIVVYGYPSNEVIDEIDKYDIRGCCLPPYKKVRDKSGNYYHCPEPKYVCSNQD CRLEVFMRKECEIMPPIDDSYHFYGREWIQQDMALQSRMLPRLRRLVHDKLGADKAKEVFEKGLKTTNVQQLHELQREYL GNKNKD >Mature_165_residues GKRGRPARIIRCAKPAKCPKCGNRHFLIVVYGYPSNEVIDEIDKYDIRGCCLPPYKKVRDKSGNYYHCPEPKYVCSNQDC RLEVFMRKECEIMPPIDDSYHFYGREWIQQDMALQSRMLPRLRRLVHDKLGADKAKEVFEKGLKTTNVQQLHELQREYLG NKNKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19570; Mature: 19439
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRGRPARIIRCAKPAKCPKCGNRHFLIVVYGYPSNEVIDEIDKYDIRGCCLPPYKKVR CCCCCCCHHEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHH DKSGNYYHCPEPKYVCSNQDCRLEVFMRKECEIMPPIDDSYHFYGREWIQQDMALQSRML CCCCCEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH PRLRRLVHDKLGADKAKEVFEKGLKTTNVQQLHELQREYLGNKNKD HHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKRGRPARIIRCAKPAKCPKCGNRHFLIVVYGYPSNEVIDEIDKYDIRGCCLPPYKKVR CCCCCCHHEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHH DKSGNYYHCPEPKYVCSNQDCRLEVFMRKECEIMPPIDDSYHFYGREWIQQDMALQSRML CCCCCEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH PRLRRLVHDKLGADKAKEVFEKGLKTTNVQQLHELQREYLGNKNKD HHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA