Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is 123966024
Identifier: 123966024
GI number: 123966024
Start: 712738
End: 713793
Strand: Direct
Name: 123966024
Synonym: P9515_07891
Alternate gene names: NA
Gene position: 712738-713793 (Clockwise)
Preceding gene: 123966023
Following gene: 123966025
Centisome position: 41.82
GC content: 24.43
Gene sequence:
>1056_bases ATGAAACAAGATACAAATCATGTTTTAAATTACAATGATGATAAAAAGGCAACCTTTGAGGAACTTCATATTCGTCATTT AAATTTATTATTAGATTTAAGAAGTAAAAAGCTAAATAATTGGTTTTTAAAAATGGCGATTATAAACACTTTTGATGACT TAAAGATTTTTTTAAATCACTTAAAAAAAAATAAACATAAATGCATTATTGCGATTAAAGAAAAAAAAATTATAGGTTAT TTAAATATATTTCCCCTAAACGATAAAGGAACTTGTTTAAAAATATCAAACCCTAATCTAATAAAGATTAATTCCTCTAT AAATGAAAAAGATTTGATAGTGGGATTGATTAAGAAAGCAATCTCAATTACAGATATGAAAACTTCAAGCTGGGTTATTA ATTCTGATTTAGAAAATAATCACCTTATTTCAAGCGCGCGAGAATTAGGTTTTCAACCACTAGATAAGGTTAAACTTTGG AGTAAAAATAAAATTAATAAATCTATTAATAATGCAAATAAAAATTCTTATTCAATTGATGAATTTCAAAAAATTAATAA ATTAAATTTTATAAATGTACTTAACTTTATTCGTTCAAATCAATCGCCTTTAACAAGAGCAATTTTGGATCTTAGTCAAA AAGACATCTCGAATAGAAATGATTTAAATAGTGGTGCTGTAATTTATAGTGATTCGGTATTATGTACAATCTTAAAAGAT ATAAATTTTCAAGATAGTAGAATTTATACTTTAACCATTGGCAGATGTTGGGATAATAGATTAAATCCTATTTTAAAAGA CATCTTAAATAATTTTTTTGAAAAATCTCCTCAGTCGATAATTAAAACTCATGAAGAGAATACTGAATTAAATTCTTATC TAGAAAATTCTGGTTTTACAGATAAATTCCAAGAAATTATCCTTGTTAGAAATACTATTATTAGGAATGAATATAAACAG ACTAATAAAATAAACCAATCATTAGAATCAATTTTTGGAAAATTAAATCCGCAAGGCAATGCTTACCCATCTCCATTTCC TTTGAAGTCCAAGTGA
Upstream 100 bases:
>100_bases TAATTCATTGAATAATATACTCAATGAAATCTTAAAGGTTAATCCAGCAGGCAATTCTGATGAAAAAACACCTATAGTGT TAATAAGGAAAAATCAATAA
Downstream 100 bases:
>100_bases AATATTCTAAGCCTAAATCTAAATCAATATTAAGTTTAGATATAGGGACAAAAAGAATAGGATTAGCCTATTGTGATTCA CTATTTATTACGGTAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKQDTNHVLNYNDDKKATFEELHIRHLNLLLDLRSKKLNNWFLKMAIINTFDDLKIFLNHLKKNKHKCIIAIKEKKIIGY LNIFPLNDKGTCLKISNPNLIKINSSINEKDLIVGLIKKAISITDMKTSSWVINSDLENNHLISSARELGFQPLDKVKLW SKNKINKSINNANKNSYSIDEFQKINKLNFINVLNFIRSNQSPLTRAILDLSQKDISNRNDLNSGAVIYSDSVLCTILKD INFQDSRIYTLTIGRCWDNRLNPILKDILNNFFEKSPQSIIKTHEENTELNSYLENSGFTDKFQEIILVRNTIIRNEYKQ TNKINQSLESIFGKLNPQGNAYPSPFPLKSK
Sequences:
>Translated_351_residues MKQDTNHVLNYNDDKKATFEELHIRHLNLLLDLRSKKLNNWFLKMAIINTFDDLKIFLNHLKKNKHKCIIAIKEKKIIGY LNIFPLNDKGTCLKISNPNLIKINSSINEKDLIVGLIKKAISITDMKTSSWVINSDLENNHLISSARELGFQPLDKVKLW SKNKINKSINNANKNSYSIDEFQKINKLNFINVLNFIRSNQSPLTRAILDLSQKDISNRNDLNSGAVIYSDSVLCTILKD INFQDSRIYTLTIGRCWDNRLNPILKDILNNFFEKSPQSIIKTHEENTELNSYLENSGFTDKFQEIILVRNTIIRNEYKQ TNKINQSLESIFGKLNPQGNAYPSPFPLKSK >Mature_351_residues MKQDTNHVLNYNDDKKATFEELHIRHLNLLLDLRSKKLNNWFLKMAIINTFDDLKIFLNHLKKNKHKCIIAIKEKKIIGY LNIFPLNDKGTCLKISNPNLIKINSSINEKDLIVGLIKKAISITDMKTSSWVINSDLENNHLISSARELGFQPLDKVKLW SKNKINKSINNANKNSYSIDEFQKINKLNFINVLNFIRSNQSPLTRAILDLSQKDISNRNDLNSGAVIYSDSVLCTILKD INFQDSRIYTLTIGRCWDNRLNPILKDILNNFFEKSPQSIIKTHEENTELNSYLENSGFTDKFQEIILVRNTIIRNEYKQ TNKINQSLESIFGKLNPQGNAYPSPFPLKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40598; Mature: 40598
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDTNHVLNYNDDKKATFEELHIRHLNLLLDLRSKKLNNWFLKMAIINTFDDLKIFLNH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHH LKKNKHKCIIAIKEKKIIGYLNIFPLNDKGTCLKISNPNLIKINSSINEKDLIVGLIKKA HHCCCCEEEEEEECCEEEEEEEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHH ISITDMKTSSWVINSDLENNHLISSARELGFQPLDKVKLWSKNKINKSINNANKNSYSID HHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCHH EFQKINKLNFINVLNFIRSNQSPLTRAILDLSQKDISNRNDLNSGAVIYSDSVLCTILKD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH INFQDSRIYTLTIGRCWDNRLNPILKDILNNFFEKSPQSIIKTHEENTELNSYLENSGFT CCCCCCEEEEEEEECHHCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCH DKFQEIILVRNTIIRNEYKQTNKINQSLESIFGKLNPQGNAYPSPFPLKSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQDTNHVLNYNDDKKATFEELHIRHLNLLLDLRSKKLNNWFLKMAIINTFDDLKIFLNH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHH LKKNKHKCIIAIKEKKIIGYLNIFPLNDKGTCLKISNPNLIKINSSINEKDLIVGLIKKA HHCCCCEEEEEEECCEEEEEEEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHH ISITDMKTSSWVINSDLENNHLISSARELGFQPLDKVKLWSKNKINKSINNANKNSYSID HHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCHH EFQKINKLNFINVLNFIRSNQSPLTRAILDLSQKDISNRNDLNSGAVIYSDSVLCTILKD HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH INFQDSRIYTLTIGRCWDNRLNPILKDILNNFFEKSPQSIIKTHEENTELNSYLENSGFT CCCCCCEEEEEEEECHHCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCH DKFQEIILVRNTIIRNEYKQTNKINQSLESIFGKLNPQGNAYPSPFPLKSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA