Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is 123966023
Identifier: 123966023
GI number: 123966023
Start: 711571
End: 712737
Strand: Direct
Name: 123966023
Synonym: P9515_07881
Alternate gene names: NA
Gene position: 711571-712737 (Clockwise)
Preceding gene: 123966022
Following gene: 123966024
Centisome position: 41.75
GC content: 26.48
Gene sequence:
>1167_bases ATGTTTATACTAAATATATTTTTCATATTTTTATTGATATTAATTATTTCTGATTTATTTATTAAATACTTCCCAAAAAC AAATTTAGTTTTACTCCCTGTAGATTTTAAAGTAAGAAAAAAGGAAAATAACAGTGAGGTGATTATTGATTTAAAAATAG TCAATAAAAGTAAATCTAAAGAAACTATGGTTTCTAACCTTAATATAGATTTAGATTTTTTTAAAAGTAAAAATAATCAA TATCTTAAAGAGTTGGATTATGAACAAAGTATTTATATTTATTCTGGATCCTCAAAAAAAAATATAAATAATTATTGGCC AACAACAATTATACAAACAAACTCAAAACTGTTTATACAAGTAATTATAAAATTCAAAGATAGTGATTTGAGAAACAAAA TTAAATATATATGGTTAAAAGTGTTTTGGGATAATTACGGTCATTTTGGAATAACTAAAAAGCAAGATGGTTTATTAGTT AACTTGAATCAACATAATCAAAACAAAAAAGAGCTAATTCATATTCCTCTGAAACAAAATTTCAAAGCTATAGCTGTTAA AACTGATTTGCTTGGATCATTTGATAATCCAATAGAAACTGTTATGAAATACTGTAAAAACGTCGTAAGAAAAAATGATA TTTTAACCATAGGTGAGACACCGTTGGCAATAATGCAAGGTAGGTATATATCTCCTCAAAATTTAGAATATAGTACATTT TCAAAAATATTATGTTATTTTTTCCACCCAACAAGTAGTTTGGCAACGGCTTGTGGAATGCAATTACTAATCGATAAAAT AGGAGTGACTCGGATAACTCTTTCCTTGCTTTTGGGAGTGCTTTTTAAGTGTATTGGAGTAAAAGGAATATTTTATAAAT TAACAGGTTTTGAATCCTCACTAATAGATGACATTAGTGGGACAGTTGTTCCTTATGACAAAAGCATAGTTATGGGTCCA ATTAAGACTAAATTATTTTGTGATAAGTTATCAAAACAGCTTGGTGTAGAAGTGGCAGTAGTTGATGTTAATGATCTTGG TGGTGTGAAAATATTAGCATGTTCAAATAATTCATTGAATAATATACTCAATGAAATCTTAAAGGTTAATCCAGCAGGCA ATTCTGATGAAAAAACACCTATAGTGTTAATAAGGAAAAATCAATAA
Upstream 100 bases:
>100_bases TATAAGCGATTCTTCATTCTCAGTTGAAAGCTTTAACGAATATAACAGTATAATTTCAGAGAAAAAATGATCCCTAATTA GTTTTTTAAATAAGAATCAC
Downstream 100 bases:
>100_bases ATGAAACAAGATACAAATCATGTTTTAAATTACAATGATGATAAAAAGGCAACCTTTGAGGAACTTCATATTCGTCATTT AAATTTATTATTAGATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MFILNIFFIFLLILIISDLFIKYFPKTNLVLLPVDFKVRKKENNSEVIIDLKIVNKSKSKETMVSNLNIDLDFFKSKNNQ YLKELDYEQSIYIYSGSSKKNINNYWPTTIIQTNSKLFIQVIIKFKDSDLRNKIKYIWLKVFWDNYGHFGITKKQDGLLV NLNQHNQNKKELIHIPLKQNFKAIAVKTDLLGSFDNPIETVMKYCKNVVRKNDILTIGETPLAIMQGRYISPQNLEYSTF SKILCYFFHPTSSLATACGMQLLIDKIGVTRITLSLLLGVLFKCIGVKGIFYKLTGFESSLIDDISGTVVPYDKSIVMGP IKTKLFCDKLSKQLGVEVAVVDVNDLGGVKILACSNNSLNNILNEILKVNPAGNSDEKTPIVLIRKNQ
Sequences:
>Translated_388_residues MFILNIFFIFLLILIISDLFIKYFPKTNLVLLPVDFKVRKKENNSEVIIDLKIVNKSKSKETMVSNLNIDLDFFKSKNNQ YLKELDYEQSIYIYSGSSKKNINNYWPTTIIQTNSKLFIQVIIKFKDSDLRNKIKYIWLKVFWDNYGHFGITKKQDGLLV NLNQHNQNKKELIHIPLKQNFKAIAVKTDLLGSFDNPIETVMKYCKNVVRKNDILTIGETPLAIMQGRYISPQNLEYSTF SKILCYFFHPTSSLATACGMQLLIDKIGVTRITLSLLLGVLFKCIGVKGIFYKLTGFESSLIDDISGTVVPYDKSIVMGP IKTKLFCDKLSKQLGVEVAVVDVNDLGGVKILACSNNSLNNILNEILKVNPAGNSDEKTPIVLIRKNQ >Mature_388_residues MFILNIFFIFLLILIISDLFIKYFPKTNLVLLPVDFKVRKKENNSEVIIDLKIVNKSKSKETMVSNLNIDLDFFKSKNNQ YLKELDYEQSIYIYSGSSKKNINNYWPTTIIQTNSKLFIQVIIKFKDSDLRNKIKYIWLKVFWDNYGHFGITKKQDGLLV NLNQHNQNKKELIHIPLKQNFKAIAVKTDLLGSFDNPIETVMKYCKNVVRKNDILTIGETPLAIMQGRYISPQNLEYSTF SKILCYFFHPTSSLATACGMQLLIDKIGVTRITLSLLLGVLFKCIGVKGIFYKLTGFESSLIDDISGTVVPYDKSIVMGP IKTKLFCDKLSKQLGVEVAVVDVNDLGGVKILACSNNSLNNILNEILKVNPAGNSDEKTPIVLIRKNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44222; Mature: 44222
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFILNIFFIFLLILIISDLFIKYFPKTNLVLLPVDFKVRKKENNSEVIIDLKIVNKSKSK CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEEEEEEEEECCCCCH ETMVSNLNIDLDFFKSKNNQYLKELDYEQSIYIYSGSSKKNINNYWPTTIIQTNSKLFIQ HHHHHHCCEEEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEE VIIKFKDSDLRNKIKYIWLKVFWDNYGHFGITKKQDGLLVNLNQHNQNKKELIHIPLKQN EEEEECCCCHHHHHEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCC FKAIAVKTDLLGSFDNPIETVMKYCKNVVRKNDILTIGETPLAIMQGRYISPQNLEYSTF CEEEEEEEHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCCCHHHH SKILCYFFHPTSSLATACGMQLLIDKIGVTRITLSLLLGVLFKCIGVKGIFYKLTGFESS HHEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHH LIDDISGTVVPYDKSIVMGPIKTKLFCDKLSKQLGVEVAVVDVNDLGGVKILACSNNSLN HHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCHH NILNEILKVNPAGNSDEKTPIVLIRKNQ HHHHHHHEECCCCCCCCCCCEEEEECCC >Mature Secondary Structure MFILNIFFIFLLILIISDLFIKYFPKTNLVLLPVDFKVRKKENNSEVIIDLKIVNKSKSK CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCEEEEEEEEECCCCCH ETMVSNLNIDLDFFKSKNNQYLKELDYEQSIYIYSGSSKKNINNYWPTTIIQTNSKLFIQ HHHHHHCCEEEEEEECCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEE VIIKFKDSDLRNKIKYIWLKVFWDNYGHFGITKKQDGLLVNLNQHNQNKKELIHIPLKQN EEEEECCCCHHHHHEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCC FKAIAVKTDLLGSFDNPIETVMKYCKNVVRKNDILTIGETPLAIMQGRYISPQNLEYSTF CEEEEEEEHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCCCHHHH SKILCYFFHPTSSLATACGMQLLIDKIGVTRITLSLLLGVLFKCIGVKGIFYKLTGFESS HHEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHH LIDDISGTVVPYDKSIVMGPIKTKLFCDKLSKQLGVEVAVVDVNDLGGVKILACSNNSLN HHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCHH NILNEILKVNPAGNSDEKTPIVLIRKNQ HHHHHHHEECCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA