Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is 123966022
Identifier: 123966022
GI number: 123966022
Start: 711007
End: 711540
Strand: Direct
Name: 123966022
Synonym: P9515_07871
Alternate gene names: NA
Gene position: 711007-711540 (Clockwise)
Preceding gene: 123966021
Following gene: 123966023
Centisome position: 41.72
GC content: 30.34
Gene sequence:
>534_bases ATGAAGCTATTTCAATCAATACTTATTTTATTAATCTTTTTAACTTCTTATCCAGTTAATGCTAGTAGAGATAGTGATAG TTATGACGGAAATATTTTTCCAATATATGCAGGAAATGGTGCAGTAGTACCTCCTCAAACAACTATTGAAGAATCTTTAA AAAACGAAAGGGTTTCTGTTTTGTTTTTTTATCTTGATGATAGCTCTGATAGTAAAGCTATGGCACCAGTTATTTCTGGT TTAGATCTAATATGGAGAAATAATATTGACTTGATAGCTATTACCACAGATGAATTACAAAGCGATAACTCAGAAACAGA CTTATATCAACCCAAGCACTATTGGAATGGTTTAATCCCTCAGACTATAATTTTGGATAGCAATGGACAAGTTAGATTTG ACATGAATGGCATGGTTAATATTGATGATCTGAATAAAGTTATTGGTGAATTAAAAGGAATAGATATAAGCGATTCTTCA TTCTCAGTTGAAAGCTTTAACGAATATAACAGTATAATTTCAGAGAAAAAATGA
Upstream 100 bases:
>100_bases GTTTCTTAACAAAAGTAGTTGGCAAAGCTATTGGATTGGTTGGGAAAGGCATCTTACAAGGTTTAGGTAGATCTAGTACA AAATAAAATTCCAAACTTTA
Downstream 100 bases:
>100_bases TCCCTAATTAGTTTTTTAAATAAGAATCACATGTTTATACTAAATATATTTTTCATATTTTTATTGATATTAATTATTTC TGATTTATTTATTAAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKLFQSILILLIFLTSYPVNASRDSDSYDGNIFPIYAGNGAVVPPQTTIEESLKNERVSVLFFYLDDSSDSKAMAPVISG LDLIWRNNIDLIAITTDELQSDNSETDLYQPKHYWNGLIPQTIILDSNGQVRFDMNGMVNIDDLNKVIGELKGIDISDSS FSVESFNEYNSIISEKK
Sequences:
>Translated_177_residues MKLFQSILILLIFLTSYPVNASRDSDSYDGNIFPIYAGNGAVVPPQTTIEESLKNERVSVLFFYLDDSSDSKAMAPVISG LDLIWRNNIDLIAITTDELQSDNSETDLYQPKHYWNGLIPQTIILDSNGQVRFDMNGMVNIDDLNKVIGELKGIDISDSS FSVESFNEYNSIISEKK >Mature_177_residues MKLFQSILILLIFLTSYPVNASRDSDSYDGNIFPIYAGNGAVVPPQTTIEESLKNERVSVLFFYLDDSSDSKAMAPVISG LDLIWRNNIDLIAITTDELQSDNSETDLYQPKHYWNGLIPQTIILDSNGQVRFDMNGMVNIDDLNKVIGELKGIDISDSS FSVESFNEYNSIISEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19841; Mature: 19841
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFQSILILLIFLTSYPVNASRDSDSYDGNIFPIYAGNGAVVPPQTTIEESLKNERVSV CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHCCCCEEE LFFYLDDSSDSKAMAPVISGLDLIWRNNIDLIAITTDELQSDNSETDLYQPKHYWNGLIP EEEEEECCCCCCHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCCCCCCHHHHCCCCC QTIILDSNGQVRFDMNGMVNIDDLNKVIGELKGIDISDSSFSVESFNEYNSIISEKK EEEEECCCCEEEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKLFQSILILLIFLTSYPVNASRDSDSYDGNIFPIYAGNGAVVPPQTTIEESLKNERVSV CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHCCCCEEE LFFYLDDSSDSKAMAPVISGLDLIWRNNIDLIAITTDELQSDNSETDLYQPKHYWNGLIP EEEEEECCCCCCHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCCCCCCHHHHCCCCC QTIILDSNGQVRFDMNGMVNIDDLNKVIGELKGIDISDSSFSVESFNEYNSIISEKK EEEEECCCCEEEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]