Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966021

Identifier: 123966021

GI number: 123966021

Start: 709370

End: 710992

Strand: Direct

Name: 123966021

Synonym: P9515_07861

Alternate gene names: NA

Gene position: 709370-710992 (Clockwise)

Preceding gene: 123966020

Following gene: 123966022

Centisome position: 41.63

GC content: 25.57

Gene sequence:

>1623_bases
TTGGAATTAATTAAGAAGAAATCACTCCTAATTATTGCTCCAAGCTTAATTGCAGAATCATTATCATTAAAATTAACTTC
ATTAGATAATAATTTAAATATCTCATTAAATGGTAATACTAAAGGGTTAAATCCAGATTTAATAATATGGAATATCCTTA
ATTACCAATCAGAAGAACTCATAAGATTGGAACTATTAAGATTAAAAGAAAGATTTGATGAATCAAAAATTCTTGTAATT
TTTTCTGGTGAGCTCATAAATAAAGCAAAAGTAGCACCAACTTTAAATAGTGAAGGTTTACTTTTAAACCCTAGTGTAGA
TAAGGTTCTTGAATCGATAAATATCATTATAGAAGGGGGTAGAGTTTTTGATCTTTGTAATAATCCCTCAGTCAAAAACA
ACAAAGTAAAAGAACTTACTTTTAATCAAAAACTATTATCTTCAGGTCTTAAACAGATTGATACAGAGATTAATTATATT
TTTAAATATGTAAATTCTGACTCAACCCCCGAATTTTATAAGTTTATTTTAAAAGGAAGATTAAGAGAGCTTATTACAGC
TAAATCTTTTCTTATATTTTTGTGGGGTAATTCATTAGAACTTTATTCAGAAGCTATTTACACTGAGAACAAAATTAACT
TTGAAAATAAAGATAATAATACTATTTTTATAAAAAATAAAAATTCAATTGAAATTTGGGATTTAATTCTTAAACGACTT
AGTAAGAGATATAACACAACTAATTTTGATGTTGACTTTAATAATTCATCTATCATTTTGTCAGGAATGAAAAAAGAATT
TATTTCACGTTTAATATGTAAAATGCTTGATGAACTTGATAATTTAATAAAAAACATAAAGGAAAACTATAAAGAAAAAG
ACTACAAAGAGGATTTCAATTCTCTTATTGAAGAACTAAGGCTTAATACTATTTCAAACATAACTGAAAGTTATTTTAGA
GTTAAAAAAGATGGTGAATCCATCTCACTAAATGAATATATTCATAAAGAAGTAACCTGTAACGAAATAGATAGAGAATC
TCATGATTCAATAATGTTTATCGATCCAATAATAAAAAATGAGCCAATAGATTATGACGGCAAATTTTTACCTTTATATG
AAACAGAATCATTTATTGTTCTTGAAAATATAATATCTAATTGGATAATAAGAAATTGCAATTTACTAGCTTCTGAAGTA
TTTAATATTTGTTCAAGTTGGCCAGAATTAAGAACGATCCTCATAAATCCCCAATTGCAATCTACAAGATCCTTTGAAAG
ATTTAGAAATAATATTAATAACTACAATAGGTGGCATGAAAATATCTATATGCCTATTTATTTATATGAAAGTAAACGTG
AATATATTGATATAATTGATTCTAAATTCACTAGATATTATAAAAATGAGAATAGAGAAAAAGAATTAGAAAATTTAGAG
TGGTTTCAAAAACAAGTTACTTTATTAGTTGAAATTAGAGATGCAATAGCTCCACAGCTTGAAATTGCTGTAAAATATAT
TGGTAACCTTTTAGTGAGTTTCTTAACAAAAGTAGTTGGCAAAGCTATTGGATTGGTTGGGAAAGGCATCTTACAAGGTT
TAGGTAGATCTAGTACAAAATAA

Upstream 100 bases:

>100_bases
AATAAGGACTATTTCGCTTGAAAATACAAGAATTATTTATGTGGCACTGGTTTTTACAAGATTTGTTAGTTAATTTTGAA
TGAGAGGTAAACTTTGAGCA

Downstream 100 bases:

>100_bases
AATTCCAAACTTTAATGAAGCTATTTCAATCAATACTTATTTTATTAATCTTTTTAACTTCTTATCCAGTTAATGCTAGT
AGAGATAGTGATAGTTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEELIRLELLRLKERFDESKILVI
FSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGGRVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYI
FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL
SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFNSLIEELRLNTISNITESYFR
VKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKNEPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEV
FNICSSWPELRTILINPQLQSTRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE
WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK

Sequences:

>Translated_540_residues
MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEELIRLELLRLKERFDESKILVI
FSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGGRVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYI
FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL
SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFNSLIEELRLNTISNITESYFR
VKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKNEPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEV
FNICSSWPELRTILINPQLQSTRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE
WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK
>Mature_540_residues
MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEELIRLELLRLKERFDESKILVI
FSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGGRVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYI
FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL
SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFNSLIEELRLNTISNITESYFR
VKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKNEPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEV
FNICSSWPELRTILINPQLQSTRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE
WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR016837
- InterPro:   IPR022552 [H]

Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 62946; Mature: 62946

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEEL
CCCCCCCCEEEEEHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCHHH
IRLELLRLKERFDESKILVIFSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGG
HHHHHHHHHHHCCCCCEEEEEECCHHCCHHCCCCCCCCCEEECCCHHHHHHHHHEEEECC
RVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYIFKYVNSDSTPEFYKFILKGR
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL
HHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFN
HHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLIEELRLNTISNITESYFRVKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKN
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHCCCCCCCCEEEECHHHCC
EPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEVFNICSSWPELRTILINPQLQ
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHEEEEECCCHH
STRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE
HHHHHHHHHHHCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEEL
CCCCCCCCEEEEEHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCHHH
IRLELLRLKERFDESKILVIFSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGG
HHHHHHHHHHHCCCCCEEEEEECCHHCCHHCCCCCCCCCEEECCCHHHHHHHHHEEEECC
RVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYIFKYVNSDSTPEFYKFILKGR
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL
HHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH
SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFN
HHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLIEELRLNTISNITESYFRVKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKN
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHCCCCCCCCEEEECHHHCC
EPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEVFNICSSWPELRTILINPQLQ
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHEEEEECCCHH
STRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE
HHHHHHHHHHHCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]