Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is 123966021
Identifier: 123966021
GI number: 123966021
Start: 709370
End: 710992
Strand: Direct
Name: 123966021
Synonym: P9515_07861
Alternate gene names: NA
Gene position: 709370-710992 (Clockwise)
Preceding gene: 123966020
Following gene: 123966022
Centisome position: 41.63
GC content: 25.57
Gene sequence:
>1623_bases TTGGAATTAATTAAGAAGAAATCACTCCTAATTATTGCTCCAAGCTTAATTGCAGAATCATTATCATTAAAATTAACTTC ATTAGATAATAATTTAAATATCTCATTAAATGGTAATACTAAAGGGTTAAATCCAGATTTAATAATATGGAATATCCTTA ATTACCAATCAGAAGAACTCATAAGATTGGAACTATTAAGATTAAAAGAAAGATTTGATGAATCAAAAATTCTTGTAATT TTTTCTGGTGAGCTCATAAATAAAGCAAAAGTAGCACCAACTTTAAATAGTGAAGGTTTACTTTTAAACCCTAGTGTAGA TAAGGTTCTTGAATCGATAAATATCATTATAGAAGGGGGTAGAGTTTTTGATCTTTGTAATAATCCCTCAGTCAAAAACA ACAAAGTAAAAGAACTTACTTTTAATCAAAAACTATTATCTTCAGGTCTTAAACAGATTGATACAGAGATTAATTATATT TTTAAATATGTAAATTCTGACTCAACCCCCGAATTTTATAAGTTTATTTTAAAAGGAAGATTAAGAGAGCTTATTACAGC TAAATCTTTTCTTATATTTTTGTGGGGTAATTCATTAGAACTTTATTCAGAAGCTATTTACACTGAGAACAAAATTAACT TTGAAAATAAAGATAATAATACTATTTTTATAAAAAATAAAAATTCAATTGAAATTTGGGATTTAATTCTTAAACGACTT AGTAAGAGATATAACACAACTAATTTTGATGTTGACTTTAATAATTCATCTATCATTTTGTCAGGAATGAAAAAAGAATT TATTTCACGTTTAATATGTAAAATGCTTGATGAACTTGATAATTTAATAAAAAACATAAAGGAAAACTATAAAGAAAAAG ACTACAAAGAGGATTTCAATTCTCTTATTGAAGAACTAAGGCTTAATACTATTTCAAACATAACTGAAAGTTATTTTAGA GTTAAAAAAGATGGTGAATCCATCTCACTAAATGAATATATTCATAAAGAAGTAACCTGTAACGAAATAGATAGAGAATC TCATGATTCAATAATGTTTATCGATCCAATAATAAAAAATGAGCCAATAGATTATGACGGCAAATTTTTACCTTTATATG AAACAGAATCATTTATTGTTCTTGAAAATATAATATCTAATTGGATAATAAGAAATTGCAATTTACTAGCTTCTGAAGTA TTTAATATTTGTTCAAGTTGGCCAGAATTAAGAACGATCCTCATAAATCCCCAATTGCAATCTACAAGATCCTTTGAAAG ATTTAGAAATAATATTAATAACTACAATAGGTGGCATGAAAATATCTATATGCCTATTTATTTATATGAAAGTAAACGTG AATATATTGATATAATTGATTCTAAATTCACTAGATATTATAAAAATGAGAATAGAGAAAAAGAATTAGAAAATTTAGAG TGGTTTCAAAAACAAGTTACTTTATTAGTTGAAATTAGAGATGCAATAGCTCCACAGCTTGAAATTGCTGTAAAATATAT TGGTAACCTTTTAGTGAGTTTCTTAACAAAAGTAGTTGGCAAAGCTATTGGATTGGTTGGGAAAGGCATCTTACAAGGTT TAGGTAGATCTAGTACAAAATAA
Upstream 100 bases:
>100_bases AATAAGGACTATTTCGCTTGAAAATACAAGAATTATTTATGTGGCACTGGTTTTTACAAGATTTGTTAGTTAATTTTGAA TGAGAGGTAAACTTTGAGCA
Downstream 100 bases:
>100_bases AATTCCAAACTTTAATGAAGCTATTTCAATCAATACTTATTTTATTAATCTTTTTAACTTCTTATCCAGTTAATGCTAGT AGAGATAGTGATAGTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEELIRLELLRLKERFDESKILVI FSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGGRVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYI FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFNSLIEELRLNTISNITESYFR VKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKNEPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEV FNICSSWPELRTILINPQLQSTRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK
Sequences:
>Translated_540_residues MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEELIRLELLRLKERFDESKILVI FSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGGRVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYI FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFNSLIEELRLNTISNITESYFR VKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKNEPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEV FNICSSWPELRTILINPQLQSTRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK >Mature_540_residues MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEELIRLELLRLKERFDESKILVI FSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGGRVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYI FKYVNSDSTPEFYKFILKGRLRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFNSLIEELRLNTISNITESYFR VKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKNEPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEV FNICSSWPELRTILINPQLQSTRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR016837 - InterPro: IPR022552 [H]
Pfam domain/function: PF12452 DUF3685; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 62946; Mature: 62946
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEEL CCCCCCCCEEEEEHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCHHH IRLELLRLKERFDESKILVIFSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGG HHHHHHHHHHHCCCCCEEEEEECCHHCCHHCCCCCCCCCEEECCCHHHHHHHHHEEEECC RVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYIFKYVNSDSTPEFYKFILKGR EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL HHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFN HHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH SLIEELRLNTISNITESYFRVKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKN HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHCCCCCCCCEEEECHHHCC EPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEVFNICSSWPELRTILINPQLQ CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHEEEEECCCHH STRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE HHHHHHHHHHHCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MELIKKKSLLIIAPSLIAESLSLKLTSLDNNLNISLNGNTKGLNPDLIIWNILNYQSEEL CCCCCCCCEEEEEHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCHHH IRLELLRLKERFDESKILVIFSGELINKAKVAPTLNSEGLLLNPSVDKVLESINIIIEGG HHHHHHHHHHHCCCCCEEEEEECCHHCCHHCCCCCCCCCEEECCCHHHHHHHHHEEEECC RVFDLCNNPSVKNNKVKELTFNQKLLSSGLKQIDTEINYIFKYVNSDSTPEFYKFILKGR EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LRELITAKSFLIFLWGNSLELYSEAIYTENKINFENKDNNTIFIKNKNSIEIWDLILKRL HHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHH SKRYNTTNFDVDFNNSSIILSGMKKEFISRLICKMLDELDNLIKNIKENYKEKDYKEDFN HHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH SLIEELRLNTISNITESYFRVKKDGESISLNEYIHKEVTCNEIDRESHDSIMFIDPIIKN HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCHHHCCCCCCCCEEEECHHHCC EPIDYDGKFLPLYETESFIVLENIISNWIIRNCNLLASEVFNICSSWPELRTILINPQLQ CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHEEEEECCCHH STRSFERFRNNINNYNRWHENIYMPIYLYESKREYIDIIDSKFTRYYKNENREKELENLE HHHHHHHHHHHCCHHHHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH WFQKQVTLLVEIRDAIAPQLEIAVKYIGNLLVSFLTKVVGKAIGLVGKGILQGLGRSSTK HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]