Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
---|---|
Accession | NC_008817 |
Length | 1,704,176 |
Click here to switch to the map view.
The map label for this gene is 123965536
Identifier: 123965536
GI number: 123965536
Start: 277565
End: 277933
Strand: Reverse
Name: 123965536
Synonym: P9515_03011
Alternate gene names: NA
Gene position: 277933-277565 (Counterclockwise)
Preceding gene: 123965538
Following gene: 123965534
Centisome position: 16.31
GC content: 35.23
Gene sequence:
>369_bases ATGTCTAAAAAAAGAAAGAGGATCAGTAGAAGGAGACTTGCGGGTCAAAGAGTTATGGCGCACGTCCCTATTTATCATAT CGAAACAGGTAAACATAAACCAGTAACAGCTGCAAGAAGATTCATAGCAGAAAATGCGTTATCTGCTCCATCTGTTTTCA ATGTTCGAAGAAATGAACATACCACTGATAGGTTCTTCTGGGGAGAAAAAGGATTATTTAGTGCACAATACGCAGAAGAA AATCATTTTTTATTTCCTTCACTTAAAGTTGTAGTTGAAGGTATAGGAGAAGAAAAAATATTTGAAGGTTTAGAACTTAC TGCAGATGATTGGGAAGAAATTGAAGAATATGAATATGCCTTCGTTTAA
Upstream 100 bases:
>100_bases CCTCTATGTCATTTGATGTGAATTCAAAGTCACAATTATAAGATTAGTAAAATCAAATAAGGCTAATCTAAGTTATAAAG AATTTTCGGAGTACTAATCA
Downstream 100 bases:
>100_bases AATAATTCTTTGATTTTTAAATTTATAGAATGAATTAAGTTGGGATCAATTTGGTGATAGCCATCAAATTCATTTAATTC ACAAAATTTATGGGATACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENALSAPSVFNVRRNEHTTDRFFWGEKGLFSAQYAEE NHFLFPSLKVVVEGIGEEKIFEGLELTADDWEEIEEYEYAFV
Sequences:
>Translated_122_residues MSKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENALSAPSVFNVRRNEHTTDRFFWGEKGLFSAQYAEE NHFLFPSLKVVVEGIGEEKIFEGLELTADDWEEIEEYEYAFV >Mature_121_residues SKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENALSAPSVFNVRRNEHTTDRFFWGEKGLFSAQYAEEN HFLFPSLKVVVEGIGEEKIFEGLELTADDWEEIEEYEYAFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14257; Mature: 14126
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENALSAPSVFNVRRNEH CCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCC TTDRFFWGEKGLFSAQYAEENHFLFPSLKVVVEGIGEEKIFEGLELTADDWEEIEEYEYA CCCCEECCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHC FV CC >Mature Secondary Structure SKKRKRISRRRLAGQRVMAHVPIYHIETGKHKPVTAARRFIAENALSAPSVFNVRRNEH CHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCC TTDRFFWGEKGLFSAQYAEENHFLFPSLKVVVEGIGEEKIFEGLELTADDWEEIEEYEYA CCCCEECCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHC FV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA