Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is cinA [C]
Identifier: 123965525
GI number: 123965525
Start: 266059
End: 267360
Strand: Reverse
Name: cinA [C]
Synonym: P9515_02901
Alternate gene names: 123965525
Gene position: 267360-266059 (Counterclockwise)
Preceding gene: 123965526
Following gene: 123965524
Centisome position: 15.69
GC content: 31.8
Gene sequence:
>1302_bases ATGAAGCCAAACTTGAATCATCGATCAAATGAACCTAATTGTAAAGGGGTTGAAATTCTTTCAATAGGAACTGAATTACT TTTAGGAAATATAGTCAACACTAATGCTCAGTGGATTTCTGAGGAACTATCAGCATTGGGACTTAATCATTTCAGGCAGT CAACTATTGGAGATAATTCCAAAAGGATCAGTAATTTAATTAAAGAAATATCTTTAAGAAGTGATCTATTGATTACTACA GGAGGTCTAGGACCTACTCCAGACGACTTAACTACTGAAGCAATCGCTAAATCTTTTAATGTCACACTATATGAAAGAGA ATCTTTATGGGACGAAATCAAAAAAAAGCTATCACTTTCAAGTTCAATTCAAAATAACTCCAGCTTAAAAAAACAATGTT TCTTCCCAAAAGATGCTCAAATAATTCATAATCCTAGAGGCACTGCTCCTGGGATGATTTGGAAACCAAAAAAGGGATTT ACTATATTAACTTTTCCTGGAGTACCAAGTGAAATGAAAGTAATGTGGAAAGAAACAGCAATTGACTATATTCAAAAAAA CTTTTCAGATGGTTATATATTTTTCTCAAATACTCTTAATTTTTCTGGAATAGGAGAATCTAAAGTCTCAGAAAAGATAG ATAACCTTTTGAAACTTAAAAACCCAACAGTTGCACCATATGCCAATTTAGGAGAGCTGAAGCTTAGAATAACCGCAAGA GCTACAAATGAACTTCAAGCAAAAAATTTAATTAAACCAGTGAAAGAGGAGTTAAAAAAAGAGTTTTCAAAGTTTATATT TGGTGAAGATAATGAGACTTTATCAAGCGTGTTAATTAAGGAATTACTCAAAAGAAAAGAATCTTTAGGTTTTGCAGAAT CCTGTACTGGAGGTCTTCTCTCTTCAACTATTACAAAAGTATCAGGATCCTCTCAAGTTTTCAAAGGTAGTATTATTTCT TACAGTAATGAACTTAAACAATCATTATTAAATATTCCTGAAGATAGGATAAAAAAATACGGTGCTGTATCTGAAGAGAT TGCTCAAGATATGACGATTAATGCAAGAGAGAAACTAAATTCTGATTGGTCAATAGCAATTAGTGGTATTGCAGGACCCA GTGGAGGTAGTAAAGAAAAGCCCGTTGGAATAGTTTATATCTCAATAGCAGGACCAAATAATCACATAACTAATATCAAA AAAATATTTAGCTCCACTAGAAATAGAGTTGAAATTCAAAGACTAAGTGTAAATGTGTGTTTAAACAGTCTTCGATTAAT CTTATTATCTAAAAGTAAGTAA
Upstream 100 bases:
>100_bases GGTGAAATTATTGCTGATAGATTACTAAATCCAGATGATTTATTAATTGAAAAAGAATGTAAGGAAAGGGTATTAAGTTT ATGTAATAGTTTTCCTCTTT
Downstream 100 bases:
>100_bases CTTTTTTTCAAATTGAGTCAAGATACCTTATTTGATAAAGTCTGGGAATTACACAAAGTTGCAAATCTTCCTGGTGGCTC GGATCAAATCTTTATCGGTC
Product: molybdenum cofactor biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKPNLNHRSNEPNCKGVEILSIGTELLLGNIVNTNAQWISEELSALGLNHFRQSTIGDNSKRISNLIKEISLRSDLLITT GGLGPTPDDLTTEAIAKSFNVTLYERESLWDEIKKKLSLSSSIQNNSSLKKQCFFPKDAQIIHNPRGTAPGMIWKPKKGF TILTFPGVPSEMKVMWKETAIDYIQKNFSDGYIFFSNTLNFSGIGESKVSEKIDNLLKLKNPTVAPYANLGELKLRITAR ATNELQAKNLIKPVKEELKKEFSKFIFGEDNETLSSVLIKELLKRKESLGFAESCTGGLLSSTITKVSGSSQVFKGSIIS YSNELKQSLLNIPEDRIKKYGAVSEEIAQDMTINAREKLNSDWSIAISGIAGPSGGSKEKPVGIVYISIAGPNNHITNIK KIFSSTRNRVEIQRLSVNVCLNSLRLILLSKSK
Sequences:
>Translated_433_residues MKPNLNHRSNEPNCKGVEILSIGTELLLGNIVNTNAQWISEELSALGLNHFRQSTIGDNSKRISNLIKEISLRSDLLITT GGLGPTPDDLTTEAIAKSFNVTLYERESLWDEIKKKLSLSSSIQNNSSLKKQCFFPKDAQIIHNPRGTAPGMIWKPKKGF TILTFPGVPSEMKVMWKETAIDYIQKNFSDGYIFFSNTLNFSGIGESKVSEKIDNLLKLKNPTVAPYANLGELKLRITAR ATNELQAKNLIKPVKEELKKEFSKFIFGEDNETLSSVLIKELLKRKESLGFAESCTGGLLSSTITKVSGSSQVFKGSIIS YSNELKQSLLNIPEDRIKKYGAVSEEIAQDMTINAREKLNSDWSIAISGIAGPSGGSKEKPVGIVYISIAGPNNHITNIK KIFSSTRNRVEIQRLSVNVCLNSLRLILLSKSK >Mature_433_residues MKPNLNHRSNEPNCKGVEILSIGTELLLGNIVNTNAQWISEELSALGLNHFRQSTIGDNSKRISNLIKEISLRSDLLITT GGLGPTPDDLTTEAIAKSFNVTLYERESLWDEIKKKLSLSSSIQNNSSLKKQCFFPKDAQIIHNPRGTAPGMIWKPKKGF TILTFPGVPSEMKVMWKETAIDYIQKNFSDGYIFFSNTLNFSGIGESKVSEKIDNLLKLKNPTVAPYANLGELKLRITAR ATNELQAKNLIKPVKEELKKEFSKFIFGEDNETLSSVLIKELLKRKESLGFAESCTGGLLSSTITKVSGSSQVFKGSIIS YSNELKQSLLNIPEDRIKKYGAVSEEIAQDMTINAREKLNSDWSIAISGIAGPSGGSKEKPVGIVYISIAGPNNHITNIK KIFSSTRNRVEIQRLSVNVCLNSLRLILLSKSK
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family
Homologues:
Organism=Escherichia coli, GI1788583, Length=328, Percent_Identity=29.8780487804878, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789052, Length=151, Percent_Identity=37.0860927152318, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1787818, Length=124, Percent_Identity=33.8709677419355, Blast_Score=86, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71993966, Length=106, Percent_Identity=35.8490566037736, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71993974, Length=106, Percent_Identity=35.8490566037736, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323832, Length=164, Percent_Identity=28.0487804878049, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CINAL_PROM5 (A2BUN8)
Other databases:
- EMBL: CP000552 - RefSeq: YP_001010606.1 - ProteinModelPortal: A2BUN8 - SMR: A2BUN8 - STRING: A2BUN8 - GeneID: 4720162 - GenomeReviews: CP000552_GR - KEGG: pmc:P9515_02901 - eggNOG: COG1058 - HOGENOM: HBG449871 - OMA: NPTVAPY - ProtClustDB: CLSK921788 - BioCyc: PMAR167542:P9515ORF_0301-MONOMER - HAMAP: MF_00226_B - InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 - Gene3D: G3DSA:3.40.980.10 - PIRSF: PIRSF006728 - SMART: SM00852 - TIGRFAMs: TIGR00199 - TIGRFAMs: TIGR00200
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth
EC number: NA
Molecular weight: Translated: 47898; Mature: 47898
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNLNHRSNEPNCKGVEILSIGTELLLGNIVNTNAQWISEELSALGLNHFRQSTIGDNS CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH KRISNLIKEISLRSDLLITTGGLGPTPDDLTTEAIAKSFNVTLYERESLWDEIKKKLSLS HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHH SSIQNNSSLKKQCFFPKDAQIIHNPRGTAPGMIWKPKKGFTILTFPGVPSEMKVMWKETA HHHCCCCCHHHHCCCCCCCCEEECCCCCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHH IDYIQKNFSDGYIFFSNTLNFSGIGESKVSEKIDNLLKLKNPTVAPYANLGELKLRITAR HHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC ATNELQAKNLIKPVKEELKKEFSKFIFGEDNETLSSVLIKELLKRKESLGFAESCTGGLL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHH SSTITKVSGSSQVFKGSIISYSNELKQSLLNIPEDRIKKYGAVSEEIAQDMTINAREKLN HHHHHHCCCCCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCHHHHCC SDWSIAISGIAGPSGGSKEKPVGIVYISIAGPNNHITNIKKIFSSTRNRVEIQRLSVNVC CCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEHHHHHHHHH LNSLRLILLSKSK HHHHEEEEEECCC >Mature Secondary Structure MKPNLNHRSNEPNCKGVEILSIGTELLLGNIVNTNAQWISEELSALGLNHFRQSTIGDNS CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH KRISNLIKEISLRSDLLITTGGLGPTPDDLTTEAIAKSFNVTLYERESLWDEIKKKLSLS HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHH SSIQNNSSLKKQCFFPKDAQIIHNPRGTAPGMIWKPKKGFTILTFPGVPSEMKVMWKETA HHHCCCCCHHHHCCCCCCCCEEECCCCCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHH IDYIQKNFSDGYIFFSNTLNFSGIGESKVSEKIDNLLKLKNPTVAPYANLGELKLRITAR HHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC ATNELQAKNLIKPVKEELKKEFSKFIFGEDNETLSSVLIKELLKRKESLGFAESCTGGLL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHH SSTITKVSGSSQVFKGSIISYSNELKQSLLNIPEDRIKKYGAVSEEIAQDMTINAREKLN HHHHHHCCCCCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCHHHHCC SDWSIAISGIAGPSGGSKEKPVGIVYISIAGPNNHITNIKKIFSSTRNRVEIQRLSVNVC CCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEHHHHHHHHH LNSLRLILLSKSK HHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA