Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639754
Identifier: 121639754
GI number: 121639754
Start: 4282804
End: 4283154
Strand: Direct
Name: 121639754
Synonym: BCG_3899
Alternate gene names: NA
Gene position: 4282804-4283154 (Clockwise)
Preceding gene: 121639753
Following gene: 121639757
Centisome position: 97.9
GC content: 63.53
Gene sequence:
>351_bases GTGACAGTACGGATGGACCCGCAGCGGTTCGACGAACTGGTGTCCGACGCACTCGACCTCATTCCGCCCGAACTGGCGGA CGCCATGGACAACGTCGTCGTGTTAGTCGCCAATCGCCACCCCCAGCACGAAAATCTGCTCGGCCAGTACGAAGGGGTCG CGTTAACCGAGCGCGGCTCCGACTACGCCGGATCGCTGCCTGATGCCATCACGATCTACCGCGAGGCGCTGCTGGACGCC TGCGACTCTGAGGATGAGGTCGTCGACCAGGTCGCCATCACGGTGATCCATGAGGTCGCCCATCACTTCGGCATCGACGA CGAGCGCTTGGACCAACTGGGCTGGGCGTGA
Upstream 100 bases:
>100_bases ACCCAGCCACCGCCACCAGACGCCGGAGCGCCGCCGGCGACCCAATCACCAGAGGCCACACCGCCTGGCCCCGCCGAGCC CGCACCGGCAGGCTAGCCGG
Downstream 100 bases:
>100_bases CGAACCAGCGCCCGGGCGCGGCAACCCGGATTTGTCGGCACCCGATGCTATGAACGGCCCATGAGCACGGACTGCCGCGA CTGCCGGGCGGGCTTGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTVRMDPQRFDELVSDALDLIPPELADAMDNVVVLVANRHPQHENLLGQYEGVALTERGSDYAGSLPDAITIYREALLDA CDSEDEVVDQVAITVIHEVAHHFGIDDERLDQLGWA
Sequences:
>Translated_116_residues MTVRMDPQRFDELVSDALDLIPPELADAMDNVVVLVANRHPQHENLLGQYEGVALTERGSDYAGSLPDAITIYREALLDA CDSEDEVVDQVAITVIHEVAHHFGIDDERLDQLGWA >Mature_115_residues TVRMDPQRFDELVSDALDLIPPELADAMDNVVVLVANRHPQHENLLGQYEGVALTERGSDYAGSLPDAITIYREALLDAC DSEDEVVDQVAITVIHEVAHHFGIDDERLDQLGWA
Specific function: Unknown
COG id: COG3824
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12881; Mature: 12750
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRMDPQRFDELVSDALDLIPPELADAMDNVVVLVANRHPQHENLLGQYEGVALTERGS CCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCHHHHHHHCCCEEEECCCC DYAGSLPDAITIYREALLDACDSEDEVVDQVAITVIHEVAHHFGIDDERLDQLGWA CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC >Mature Secondary Structure TVRMDPQRFDELVSDALDLIPPELADAMDNVVVLVANRHPQHENLLGQYEGVALTERGS CCCCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCHHHHHHHCCCEEEECCCC DYAGSLPDAITIYREALLDACDSEDEVVDQVAITVIHEVAHHFGIDDERLDQLGWA CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA