Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639757
Identifier: 121639757
GI number: 121639757
Start: 4285169
End: 4285945
Strand: Direct
Name: 121639757
Synonym: BCG_3902
Alternate gene names: NA
Gene position: 4285169-4285945 (Clockwise)
Preceding gene: 121639754
Following gene: 121639758
Centisome position: 97.96
GC content: 66.8
Gene sequence:
>777_bases ATGCCGCCGCTCACCAGTCTCGCGCCGACTACTGCCGAGCGAATTCGCAGCGCCTGCGCGCGGGCCGGGGGCGCCTTGCT GGTGGTTGAGCGGGAGGATCCGGTCCCCGTGCCCATACACCATTTGTTGTACGACGGGTCCTTCGCCGTGGCGGTTCCGG TCGATCGTGGCGAGGTGTCCGGTTCGCAAGCGCTGCTGGAGTTGACTGACTATGCGCCGCTGCCGGTGCGTGAACCCGTC CGTTCGCTGGTGTGGATCCGCGGCTGCCTCCACCAGATCCCGCCCGCAGAGCTGGTTGAGACCCTGGACCTGATCGCCAC CGATAATCCGAATCCGGCCCTGCTACAAGTCGAGACCCCGAGGTCCGGGCCGGCCGATGCGGCGGAGACCCGGTATACCA TGCAGCGGCTGGAGATCGAATCCGTAGTGGTGACCGACGCCACCGGCGCCGAACCCGTTACCGTGGCGGACCTGCTCGCG GCCCGACCCGATCCGTTTTGTGAAATCGAATCAACCTTGCTCTGGCACCTAGCCACCGCCCATGACGATGTGGTCGCGCG GCTGGTATCCAGGCTGCCGGCACCGCTACGACGCGGACAGATCCGCCCCCTCGGTCTCGATCGGTACGGCGTCCGGTTTC GCATTGAAGCTCGCGACGGAGACCGCGACATCCGACTGCCGTTCCATAAGCCGGTGGACGACATGACCGGGCTAAGCCAG GCCATCCGGGTGCTCATGGGTTGCCCGTTCCGCAACGGGCTGCGCGCCCGCAGGTAG
Upstream 100 bases:
>100_bases ACCACGCTCACAACCCTAACGACGCAAAGCCGACCGCCAACTCTTGCGACCAGACCGTGCATTAGTTAACTTAGGCTTAC CTAAACACAGGAGGTCGTGG
Downstream 100 bases:
>100_bases CAGGCACAGCCGCCGCTCGGCCGCGTTGGCCGGCTGCATCCAAAGGTTCAGCCACGTACGTTGTCTAGGTCCGGGGTTGG CATCCGACAACCCGACGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPPLTSLAPTTAERIRSACARAGGALLVVEREDPVPVPIHHLLYDGSFAVAVPVDRGEVSGSQALLELTDYAPLPVREPV RSLVWIRGCLHQIPPAELVETLDLIATDNPNPALLQVETPRSGPADAAETRYTMQRLEIESVVVTDATGAEPVTVADLLA ARPDPFCEIESTLLWHLATAHDDVVARLVSRLPAPLRRGQIRPLGLDRYGVRFRIEARDGDRDIRLPFHKPVDDMTGLSQ AIRVLMGCPFRNGLRARR
Sequences:
>Translated_258_residues MPPLTSLAPTTAERIRSACARAGGALLVVEREDPVPVPIHHLLYDGSFAVAVPVDRGEVSGSQALLELTDYAPLPVREPV RSLVWIRGCLHQIPPAELVETLDLIATDNPNPALLQVETPRSGPADAAETRYTMQRLEIESVVVTDATGAEPVTVADLLA ARPDPFCEIESTLLWHLATAHDDVVARLVSRLPAPLRRGQIRPLGLDRYGVRFRIEARDGDRDIRLPFHKPVDDMTGLSQ AIRVLMGCPFRNGLRARR >Mature_257_residues PPLTSLAPTTAERIRSACARAGGALLVVEREDPVPVPIHHLLYDGSFAVAVPVDRGEVSGSQALLELTDYAPLPVREPVR SLVWIRGCLHQIPPAELVETLDLIATDNPNPALLQVETPRSGPADAAETRYTMQRLEIESVVVTDATGAEPVTVADLLAA RPDPFCEIESTLLWHLATAHDDVVARLVSRLPAPLRRGQIRPLGLDRYGVRFRIEARDGDRDIRLPFHKPVDDMTGLSQA IRVLMGCPFRNGLRARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28283; Mature: 28152
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLTSLAPTTAERIRSACARAGGALLVVEREDPVPVPIHHLLYDGSFAVAVPVDRGEVS CCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHEECCCEEEEEECCCCCCC GSQALLELTDYAPLPVREPVRSLVWIRGCLHQIPPAELVETLDLIATDNPNPALLQVETP CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECC RSGPADAAETRYTMQRLEIESVVVTDATGAEPVTVADLLAARPDPFCEIESTLLWHLATA CCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH HDDVVARLVSRLPAPLRRGQIRPLGLDRYGVRFRIEARDGDRDIRLPFHKPVDDMTGLSQ HHHHHHHHHHHCCCHHHCCCCCEECCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHH AIRVLMGCPFRNGLRARR HHHHHHCCCCCCCCCCCC >Mature Secondary Structure PPLTSLAPTTAERIRSACARAGGALLVVEREDPVPVPIHHLLYDGSFAVAVPVDRGEVS CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHEECCCEEEEEECCCCCCC GSQALLELTDYAPLPVREPVRSLVWIRGCLHQIPPAELVETLDLIATDNPNPALLQVETP CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECC RSGPADAAETRYTMQRLEIESVVVTDATGAEPVTVADLLAARPDPFCEIESTLLWHLATA CCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH HDDVVARLVSRLPAPLRRGQIRPLGLDRYGVRFRIEARDGDRDIRLPFHKPVDDMTGLSQ HHHHHHHHHHHCCCHHHCCCCCEECCCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHH AIRVLMGCPFRNGLRARR HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA