Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639753
Identifier: 121639753
GI number: 121639753
Start: 4281449
End: 4282807
Strand: Direct
Name: 121639753
Synonym: BCG_3898
Alternate gene names: NA
Gene position: 4281449-4282807 (Clockwise)
Preceding gene: 121639751
Following gene: 121639754
Centisome position: 97.87
GC content: 69.9
Gene sequence:
>1359_bases ATGTTGGACGCGCCCGAGCAGGACCCCGTCGATCCCGGCGACCCGGCCAGCCCCCCGCACGGGGAGGCGGAACAGCCGCT GCCCGGGCCTCGGTGGCCACGCGCCCTGCGCGCGTCGGCGACCCGGCGAGCGCTACTCCTCACCGCTTTGGGTGGCCTGC TGATTGCCGGGCTGGTCACCGCGATTCCCGCCGTCGGCCGCGCGCCGGAGCGGCTGGCCGGCTACATCGCCAGCTATCCG GTGCCCAGCACTGGCGCCAAGATCAACGCTTCGTTCAACCGCGTCGCCAGTGGTGACTGCTTGATGTGGCCGGACGGCAC GCCGGAGTCTGCCGCCATCGTCAGCTGTGCCGACGAGCACCGGTTCGAAGTCGCCGAGTCCATTGACATGCGGACATTCC CCGGCATGGAGTACGGGCAAAACGCTGCTCCCCCGTCGCCCGCCCGCATTCAGCAGATCAGCGAGGAGCAGTGCGAAGCT GCTGTGCGCCGCTACCTCGGCACGAAGTTCGATCCCAACAGCAAGTTCACCATCAGCATGCTGTGGCCCGGCGACCGGGC GTGGCGGCAGGCCGGTGAGCGCCGCATGCTCTGTGGCTTGCAGTCGCCCGGTCCGAACAACCAGCAGCTCGCCTTCAAGG GCAAGGTCGCCGACATCGACCAGTCCAAGGTCTGGCCGGCCGGTACCTGCCTGGGCATCGATGCCACCACCAACCAGCCG ATCGACGTGCCGGTGGACTGCGCGGCACCGCACGCGATGGAGGTATCCGGCACGGTCAACCTGGCCGAGAGGTTTCCCGA CGCGCTGCCGAGCGAACCCGAGCAGGACGGGTTCATCAAGGACGCGTGCACCCGGATGACGGACGCCTACCTCGCACCCC TCAAGTTGCGTACCACCACCCTGACGCTGATCTACCCCACGCTGACGCTGCCCAGCTGGTCGGCGGGTAGCCGCGTGGTC GCATGCAGTATCGGCGCGACCCTGGGCAACGGGGGGTGGGCAACCCTGGTGAACAGCGCTAAGGGGGCGCTGCTGATCAA CGGCCAGCCGCCGGTACCCCCACCCGACATTCCCGAGGAGCGGCTCAACCTGCCGCCGATTCCGCTTCAGCTGCCAACGC CTCGGCCCGCCCCCCCCGGCTCAGCAGCTGCCAAGTACCCCACCAGGCACTCAGCACCTCCCTGCCCAACAGCCAGTGGT TACGCCCACCCGGCCACCCGAATCGCATGCGCCAGCGTCGGCAGCACCGGCCGAGACCCAGCCACCGCCACCAGACGCCG GAGCGCCGCCGGCGACCCAATCACCAGAGGCCACACCGCCTGGCCCCGCCGAGCCCGCACCGGCAGGCTAGCCGGGTGA
Upstream 100 bases:
>100_bases GTGGCGGCAGAGGACCATCCACCCGCGATGAAGCGATCCCGCAAGCTGACAACTGCAACATTGGTCATGCGGCCCCGCCG ACCCTGTCAGAATGGAGCGG
Downstream 100 bases:
>100_bases CAGTACGGATGGACCCGCAGCGGTTCGACGAACTGGTGTCCGACGCACTCGACCTCATTCCGCCCGAACTGGCGGACGCC ATGGACAACGTCGTCGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASYP VPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEA AVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRVV ACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPLQLPTPRPAPPGSAAAKYPTRHSAPPCPTASG YAHPATRIACASVGSTGRDPATATRRRSAAGDPITRGHTAWPRRARTGRLAG
Sequences:
>Translated_452_residues MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASYP VPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEA AVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRVV ACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPLQLPTPRPAPPGSAAAKYPTRHSAPPCPTASG YAHPATRIACASVGSTGRDPATATRRRSAAGDPITRGHTAWPRRARTGRLAG >Mature_452_residues MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVTAIPAVGRAPERLAGYIASYP VPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEHRFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEA AVRRYLGTKFDPNSKFTISMLWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTTLTLIYPTLTLPSWSAGSRVV ACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEERLNLPPIPLQLPTPRPAPPGSAAAKYPTRHSAPPCPTASG YAHPATRIACASVGSTGRDPATATRRRSAAGDPITRGHTAWPRRARTGRLAG
Specific function: May play a role in septum formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential). Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47742; Mature: 47742
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPAVGRAPERLAGYIASYPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH HHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCEECCCCEEECCCCCCCCCEEEEECHHH RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP ECCCCHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCC IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT CCCCCCCCCCCEEEECCCEEHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEE LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE EEEEEEEECCCCCCCCCEEEEEEECCEECCCCCEEEECCCCCEEEECCCCCCCCCCCCHH RLNLPPIPLQLPTPRPAPPGSAAAKYPTRHSAPPCPTASGYAHPATRIACASVGSTGRDP HCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC ATATRRRSAAGDPITRGHTAWPRRARTGRLAG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDAPEQDPVDPGDPASPPHGEAEQPLPGPRWPRALRASATRRALLLTALGGLLIAGLVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AIPAVGRAPERLAGYIASYPVPSTGAKINASFNRVASGDCLMWPDGTPESAAIVSCADEH HHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCCEECCCCEEECCCCCCCCCEEEEECHHH RFEVAESIDMRTFPGMEYGQNAAPPSPARIQQISEEQCEAAVRRYLGTKFDPNSKFTISM HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE LWPGDRAWRQAGERRMLCGLQSPGPNNQQLAFKGKVADIDQSKVWPAGTCLGIDATTNQP ECCCCHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCC IDVPVDCAAPHAMEVSGTVNLAERFPDALPSEPEQDGFIKDACTRMTDAYLAPLKLRTTT CCCCCCCCCCCEEEECCCEEHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEE LTLIYPTLTLPSWSAGSRVVACSIGATLGNGGWATLVNSAKGALLINGQPPVPPPDIPEE EEEEEEEECCCCCCCCCEEEEEEECCEECCCCCEEEECCCCCEEEECCCCCCCCCCCCHH RLNLPPIPLQLPTPRPAPPGSAAAKYPTRHSAPPCPTASGYAHPATRIACASVGSTGRDP HCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC ATATRRRSAAGDPITRGHTAWPRRARTGRLAG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]