Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639440
Identifier: 121639440
GI number: 121639440
Start: 3936413
End: 3937324
Strand: Direct
Name: 121639440
Synonym: BCG_3585
Alternate gene names: NA
Gene position: 3936413-3937324 (Clockwise)
Preceding gene: 121639438
Following gene: 121639441
Centisome position: 89.98
GC content: 66.23
Gene sequence:
>912_bases GTGGGGCCCACGTTAAGCAGGTTTTTCACCGCCTTGCGTGCACGCCGCATTGTCGGGGTGCGCGGATCCGACGGCCGAGT CCATGTGCCGCCGGTGGAATATGACCCGGTTACCTACGAACCCCTGAGCGAAATGGTACCGGTGTCCAGCGTCGGCACCG TCGCGTCCTGGACCTGGCAACCCGAGCCGCTAGCCGGCCAGCCCCTGGACCGGCCGTTCGCCTGGGCGCTGATCAAGCTC GACGGCGCCGACACCTTGCTGATGCACGCCGTTGATGTGGGAACCGCCGGCCCTTCCGCCATCCACACCGGCGCCCGGGT GCACGCGCATTGGGCCGACCAACCGGTGGGCGCCATCACCGATATCGCCTGCTTTGCGCTCGGCGAGACCGCAGAACCGG TGGCGGCTCACAAGACCGAGGATGCGCGGGACCCGGTCACCATGATCGTCACGCCGATCCAGCTGGAAATTCAGCACACC GCCTCGCACGAGGAGAGTGCGTATCTGCGCGCCATCGCCCAGGGCAAGCTCGTGGGCGCCAGAACCGGAAAGACCGGCAA GGTATACTTCCCGCCGCATGGCGCCGACCCGGCCACCGGGAAACCCACCTCCGAGTTTGTCGAGCTGCCCGACAAGGGCA CGGTGACGACGTTCGCGATCGTCAACATCCCGTTCCTGGGCCAGCGAATCAAGCCGCCCTATGTGGCGGCCTACGTGTTG CTCGACGGCGCCGACATCCCGTTTTTGCATTTGGTTTCCGACGTCGACGCGCACCAGGTGCGGATGGGCATGCGCGTCGA GGCGGTGTGGAAGCCGCGGGAGCGGTGGGGACTGGGCATCGACAACATCGAGTACTTCCGCCCCACCGGCGAACCGGATG CCGACTACGACACCTACAAGCACCACCTGTAA
Upstream 100 bases:
>100_bases GACAGGCGTGACAGCCAGCTCGAGCGGCCCGGCGCTGATCGATCACTCTGAGCCGCCCCTTTCCGCGCCCCTCACGTTGT CCTTCGACTACACCCGTTCG
Downstream 100 bases:
>100_bases AGGGCCCACCAACCAATGAGCGTTCGCGATATTGCCGTTGTCGGCTTCGCCCACGCCCCGCACGTGCGCCGCACCGACGG CACTACCAACGGCGTCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MGPTLSRFFTALRARRIVGVRGSDGRVHVPPVEYDPVTYEPLSEMVPVSSVGTVASWTWQPEPLAGQPLDRPFAWALIKL DGADTLLMHAVDVGTAGPSAIHTGARVHAHWADQPVGAITDIACFALGETAEPVAAHKTEDARDPVTMIVTPIQLEIQHT ASHEESAYLRAIAQGKLVGARTGKTGKVYFPPHGADPATGKPTSEFVELPDKGTVTTFAIVNIPFLGQRIKPPYVAAYVL LDGADIPFLHLVSDVDAHQVRMGMRVEAVWKPRERWGLGIDNIEYFRPTGEPDADYDTYKHHL
Sequences:
>Translated_303_residues MGPTLSRFFTALRARRIVGVRGSDGRVHVPPVEYDPVTYEPLSEMVPVSSVGTVASWTWQPEPLAGQPLDRPFAWALIKL DGADTLLMHAVDVGTAGPSAIHTGARVHAHWADQPVGAITDIACFALGETAEPVAAHKTEDARDPVTMIVTPIQLEIQHT ASHEESAYLRAIAQGKLVGARTGKTGKVYFPPHGADPATGKPTSEFVELPDKGTVTTFAIVNIPFLGQRIKPPYVAAYVL LDGADIPFLHLVSDVDAHQVRMGMRVEAVWKPRERWGLGIDNIEYFRPTGEPDADYDTYKHHL >Mature_302_residues GPTLSRFFTALRARRIVGVRGSDGRVHVPPVEYDPVTYEPLSEMVPVSSVGTVASWTWQPEPLAGQPLDRPFAWALIKLD GADTLLMHAVDVGTAGPSAIHTGARVHAHWADQPVGAITDIACFALGETAEPVAAHKTEDARDPVTMIVTPIQLEIQHTA SHEESAYLRAIAQGKLVGARTGKTGKVYFPPHGADPATGKPTSEFVELPDKGTVTTFAIVNIPFLGQRIKPPYVAAYVLL DGADIPFLHLVSDVDAHQVRMGMRVEAVWKPRERWGLGIDNIEYFRPTGEPDADYDTYKHHL
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33004; Mature: 32873
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPTLSRFFTALRARRIVGVRGSDGRVHVPPVEYDPVTYEPLSEMVPVSSVGTVASWTWQ CCCHHHHHHHHHHHHHEEEEECCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCEEEECCC PEPLAGQPLDRPFAWALIKLDGADTLLMHAVDVGTAGPSAIHTGARVHAHWADQPVGAIT CCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHCCCCEEEEECCCCCCCHHH DIACFALGETAEPVAAHKTEDARDPVTMIVTPIQLEIQHTASHEESAYLRAIAQGKLVGA HHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEE RTGKTGKVYFPPHGADPATGKPTSEFVELPDKGTVTTFAIVNIPFLGQRIKPPYVAAYVL CCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEE LDGADIPFLHLVSDVDAHQVRMGMRVEAVWKPRERWGLGIDNIEYFRPTGEPDADYDTYK ECCCCCCCEEHHCCCCHHHHHHCCEEEEEECCHHHHCCCCCCEEEECCCCCCCCCCCHHH HHL CCC >Mature Secondary Structure GPTLSRFFTALRARRIVGVRGSDGRVHVPPVEYDPVTYEPLSEMVPVSSVGTVASWTWQ CCHHHHHHHHHHHHHEEEEECCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCEEEECCC PEPLAGQPLDRPFAWALIKLDGADTLLMHAVDVGTAGPSAIHTGARVHAHWADQPVGAIT CCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHCCCCEEEEECCCCCCCHHH DIACFALGETAEPVAAHKTEDARDPVTMIVTPIQLEIQHTASHEESAYLRAIAQGKLVGA HHHHHCCCCCCCCHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHCCCEEEE RTGKTGKVYFPPHGADPATGKPTSEFVELPDKGTVTTFAIVNIPFLGQRIKPPYVAAYVL CCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEE LDGADIPFLHLVSDVDAHQVRMGMRVEAVWKPRERWGLGIDNIEYFRPTGEPDADYDTYK ECCCCCCCEEHHCCCCHHHHHHCCEEEEEECCHHHHCCCCCCEEEECCCCCCCCCCCHHH HHL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA