Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639383
Identifier: 121639383
GI number: 121639383
Start: 3862474
End: 3863331
Strand: Direct
Name: 121639383
Synonym: BCG_3528
Alternate gene names: NA
Gene position: 3862474-3863331 (Clockwise)
Preceding gene: 121639374
Following gene: 121639384
Centisome position: 88.29
GC content: 65.97
Gene sequence:
>858_bases ATGACCAATTGTGCCGCCGGCAAACCCAGCTCAGGCCCTAACCTCGGCCGATTCGGATCGTTCGGACGCGGCGTCACCCC CCAGCAGGCCACAGAAATCGAGGCGCTGGGCTACGGGGCGGTCTGGGTGGGAGGCTCACCACCCGCCGCACTGTCCTGGG TGGAACCGATTCTGCAAGCGACCACCACATTGTGTGTGGCCACCGGCATTGTCAATATCTGGTCGGCACCGGCCCAGCGA GTCGCCGAATCGTTCCACCGCATCGAGGCGGCCTACCCGGGCCGCTTTCTGCTGGGTATCGGAGTCGGGCATGCCGAGAT GATCAGTGAGTACCGCAAGCCCTACAACGCGCTGGTGGAATACCTAGACCGGCTCGACGACTATGGGGTGCCCGCCAACC GCCGGGTGGTGGCCGCACTGGGCCCCCGGGTCCTGGGCCTGTCCGCACGCCGCAGCGCCGGGGCGCACCCGTACCTGACC ACACCCGAACACACGGCACGGGCCCGTGAGCTGATTGGTCCGTCGGCGTTCCTGGCGCCCGAACACAAGGTGGTGCTGAC CACCGACTCGGCAAGGGCCCGTACGGTGGGACGCCAGGCGCTCGATATGTACTTCAACCTGGCTAACTACCGCAACAACT GGAAACGGCTGGGCTTCACCGACGACGAAGTCTCCCGGCCGGGCAGCGACCGCCTGGTTGACGCCGTGGTCGCCTACGGC ACTCCAGACGCGATCGCGGCACGGCTGAACGAACACCTGCTTGCAGGCGCCGACCATGTCCCTATTCAGGTCCTCACCGA AGATGACAACCTGGTGTCGGCGCTGACCGAACTCGCGAAGCCGCTCCGACTGACTTGA
Upstream 100 bases:
>100_bases CCGCCAACCCACATTACCCGCATCGCCGTGCTCTGCGCAAAACGCCGTAGGCCACGCGCTCACCGGAATAGCACCGGTGA GCCGAGCGGTTAGAGCAACC
Downstream 100 bases:
>100_bases TCCCGAAACGGAGGGTTGCGAACCCAACTGGTCGCGGCTCCACTCGGTTAAGGCTCGGTTAGGGTTTGATCCATGCGGTT GCTAGTCACCGGTGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTNCAAGKPSSGPNLGRFGSFGRGVTPQQATEIEALGYGAVWVGGSPPAALSWVEPILQATTTLCVATGIVNIWSAPAQR VAESFHRIEAAYPGRFLLGIGVGHAEMISEYRKPYNALVEYLDRLDDYGVPANRRVVAALGPRVLGLSARRSAGAHPYLT TPEHTARARELIGPSAFLAPEHKVVLTTDSARARTVGRQALDMYFNLANYRNNWKRLGFTDDEVSRPGSDRLVDAVVAYG TPDAIAARLNEHLLAGADHVPIQVLTEDDNLVSALTELAKPLRLT
Sequences:
>Translated_285_residues MTNCAAGKPSSGPNLGRFGSFGRGVTPQQATEIEALGYGAVWVGGSPPAALSWVEPILQATTTLCVATGIVNIWSAPAQR VAESFHRIEAAYPGRFLLGIGVGHAEMISEYRKPYNALVEYLDRLDDYGVPANRRVVAALGPRVLGLSARRSAGAHPYLT TPEHTARARELIGPSAFLAPEHKVVLTTDSARARTVGRQALDMYFNLANYRNNWKRLGFTDDEVSRPGSDRLVDAVVAYG TPDAIAARLNEHLLAGADHVPIQVLTEDDNLVSALTELAKPLRLT >Mature_284_residues TNCAAGKPSSGPNLGRFGSFGRGVTPQQATEIEALGYGAVWVGGSPPAALSWVEPILQATTTLCVATGIVNIWSAPAQRV AESFHRIEAAYPGRFLLGIGVGHAEMISEYRKPYNALVEYLDRLDDYGVPANRRVVAALGPRVLGLSARRSAGAHPYLTT PEHTARARELIGPSAFLAPEHKVVLTTDSARARTVGRQALDMYFNLANYRNNWKRLGFTDDEVSRPGSDRLVDAVVAYGT PDAIAARLNEHLLAGADHVPIQVLTEDDNLVSALTELAKPLRLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30651; Mature: 30520
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNCAAGKPSSGPNLGRFGSFGRGVTPQQATEIEALGYGAVWVGGSPPAALSWVEPILQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH TTTLCVATGIVNIWSAPAQRVAESFHRIEAAYPGRFLLGIGVGHAEMISEYRKPYNALVE HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCHHHHHHH YLDRLDDYGVPANRRVVAALGPRVLGLSARRSAGAHPYLTTPEHTARARELIGPSAFLAP HHHHHHHCCCCCCCEEEEECCCHHCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCEECC EHKVVLTTDSARARTVGRQALDMYFNLANYRNNWKRLGFTDDEVSRPGSDRLVDAVVAYG CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHCCCCCHHHHHHHHHCC TPDAIAARLNEHLLAGADHVPIQVLTEDDNLVSALTELAKPLRLT CHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TNCAAGKPSSGPNLGRFGSFGRGVTPQQATEIEALGYGAVWVGGSPPAALSWVEPILQA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH TTTLCVATGIVNIWSAPAQRVAESFHRIEAAYPGRFLLGIGVGHAEMISEYRKPYNALVE HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCHHHHHHH YLDRLDDYGVPANRRVVAALGPRVLGLSARRSAGAHPYLTTPEHTARARELIGPSAFLAP HHHHHHHCCCCCCCEEEEECCCHHCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCEECC EHKVVLTTDSARARTVGRQALDMYFNLANYRNNWKRLGFTDDEVSRPGSDRLVDAVVAYG CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHCCCCCHHHHHHHHHCC TPDAIAARLNEHLLAGADHVPIQVLTEDDNLVSALTELAKPLRLT CHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA