Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639374
Identifier: 121639374
GI number: 121639374
Start: 3855973
End: 3857658
Strand: Direct
Name: 121639374
Synonym: BCG_3519
Alternate gene names: NA
Gene position: 3855973-3857658 (Clockwise)
Preceding gene: 121639373
Following gene: 121639383
Centisome position: 88.15
GC content: 60.62
Gene sequence:
>1686_bases ATGCCGGGCGTCATAACAAACAGTGAAAGCCCAACCGCAGCCGACCACGACAGAATTACGGCCACCAGAGAGACGCTGGA GGATTACACACTGCGGTTGGCGCCGCGCAGCTATCGCAGGTGGCCCCCGGCGGTGGTGGGCATCTCCGCTCTCGGCGGCA TCGCCTACCTGGCGGACTTCGCGATCGGCGCCAATGTCGGTATCACGTGGGGTACCGCGAACGCGCTGTGCGGAATCGCA ATCTTCGCACTGGTGGTCTTCGTCACCGGCTTGCCGCTGGCCTACTACGCGGCGCGGTACAACATCGACCTGGATCTGAT TACCCGCGGTAGCGGTTTCGGCTACTACGGCTCGGTGGTCACCAACGTCATCTTTGCCACGTTCACGTTCATCTTCTTTG CCCTGGAGGGCTCGATCATGGCTCAGGGCCTTAAGCTAGGCCTGCACATTCCGCTGTGGGCGGGTTACGCGTGCTCGACC CTGATCATCTTCCCGCTGGTGGTCTACGGGATGAAAGTTTTGTCACAGCTGCAACTTTGGACCACCCCGCTCTGGCTGAT CCTGATGGCGGCCCCATTTGGCTACCTGGTAGTCAGCCATCCCGATTCGATTGGACAGTTTTTCTCCTACGCCGGCAAGG ATGGTCATGGCGGCCTTAGCTTCGGTTCTGTCCTGTTGGCAGCGGGAGTGTGCCTGTCACTCATCGCTCAGATCGCCGAG CAGATCGACTACCTGCGCTTCATGCCGCCACGGACGCCGGAGAACGCGAACAGGTGGTGGACGTGGACGCTGCTGGCCGG TCCCGGCTGGGTTGCATTTGGGGCGACCAAACAGATCATCGGCCTGTTCCTGGCGGTCTATCTGATGGCCAACATCCCCG GCTCGTCGACAATCGCCAACCAGCCGGTGCACCAATTCATGCAGATATACCGCACCTTCGTACCGGGCTGGCTGGCGTTG ACACTCGCCGTCATCCTGGTGGTCTTGAGCCAGATCAAGATCAACGTCACGAACGCGTATTCGGGCTCGCTGGCGTGGAC CAATTCATTCACACGGCTCACCAAGCACTATCCCGGGCGGGTCGTGTTTCTTGGGGTTAACCTCGCGATTGCGTTGATTC TCATGGAAGCCAACATGTTTGACTTCCTGAACACAATCCTGGGTTGCTACGCCAATTGCGGTATGGCCTGGGTGGTGGCG GTGGCGTCGGACATCGGCTTCAACAAGTATCTGCTCGGCCTGTCGCCGAAGACTCCCGAATTCCGCCGCGGCATGCTATA CGCCATCAACCCGGTCGGCTTCGGGTCGTTGCTGCTGGCCGCGGGGCTGTCGATCGTCACCTTCTTCGGCGGTCTGGGTG CGGCACTGCAGCCTTATTCACCATTGGTGGCAATCGTCACCGCGTTGGTAATGCCGCCCATTCTGGCAGCCGCGACCAAA GGCAAGTACTACCTTCGCCGCACGCACGACGGTATCGATCTGCCCATGTACGACGAGCACGGCAATCCCTCGGCCGCGGT GTTGACTTGCCATGTCTGCCACCAGGATTTCGAGCGGCCCGACATGCTGGCCTGCCAGACCCATGGTGCGCATGTCTGTT CGCTGTGCTTGTCCACGGACAAGCAGGCCGAGCATGTGCTTCCTGGGTTAGCCCGAGCGCACATCCCGGGTGACCAAGTT CCGTGA
Upstream 100 bases:
>100_bases GCCGCGATGAACCGCAATCATTTCACCGGAAGGGAAGTGTGCGGACACGCTAACCGGACGCTCGGGCTAACTTCGACCGC TATTGCGCTGAGGAGGGTTG
Downstream 100 bases:
>100_bases CGCGAGCTGGTCATCGGGCGGATAGTCCACCTGGATCAACGTCAACCCGTGCGCCGGCGCGACCGCGAAGTCGCTGGATC GTCCTGTCGCGGTGAGCAGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Histidine Kinase; Sensor Histidine Kinase/Response Regulator; Two-Component Hybrid Sensor And Regulator; Periplasmic Sensor Hybrid Histidine Kinase; Permease For Cytosine/Purines Uracil Thiamine Allantoin; Two Component Sensor Kinase; Signal Transduction Histidine Kinase; ATPase Histidine Kinase- DNA Gyrase B- And; Two-Component Sensor Histidine Kinase Protein; Two-Component Sensor Kinase; Two Component Hybrid Sensor Histidine Kinase And Regulator; Sensor Histidine Kinase; Sensor Histidine Kinase/Response Regulator Protein; Fused Histidine Kinase Sensor/Response Regulator; Multi-Sensor Hybrid Histidine Kinase; Purine-Cytosine Permease; Two-Component Sensor Histidine Kinase; Sensory Box Histidine Kinase; Cytosine Permease; Integral Membrane Protein; NCS1 Family Transporter; Permease For Cytosine/Purine Uracil Thiamine Allantoin
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MPGVITNSESPTAADHDRITATRETLEDYTLRLAPRSYRRWPPAVVGISALGGIAYLADFAIGANVGITWGTANALCGIA IFALVVFVTGLPLAYYAARYNIDLDLITRGSGFGYYGSVVTNVIFATFTFIFFALEGSIMAQGLKLGLHIPLWAGYACST LIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVSHPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAE QIDYLRFMPPRTPENANRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLAL TLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANMFDFLNTILGCYANCGMAWVVA VASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATK GKYYLRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQV P
Sequences:
>Translated_561_residues MPGVITNSESPTAADHDRITATRETLEDYTLRLAPRSYRRWPPAVVGISALGGIAYLADFAIGANVGITWGTANALCGIA IFALVVFVTGLPLAYYAARYNIDLDLITRGSGFGYYGSVVTNVIFATFTFIFFALEGSIMAQGLKLGLHIPLWAGYACST LIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVSHPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAE QIDYLRFMPPRTPENANRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLAL TLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANMFDFLNTILGCYANCGMAWVVA VASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATK GKYYLRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQV P >Mature_560_residues PGVITNSESPTAADHDRITATRETLEDYTLRLAPRSYRRWPPAVVGISALGGIAYLADFAIGANVGITWGTANALCGIAI FALVVFVTGLPLAYYAARYNIDLDLITRGSGFGYYGSVVTNVIFATFTFIFFALEGSIMAQGLKLGLHIPLWAGYACSTL IIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVSHPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAEQ IDYLRFMPPRTPENANRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIANQPVHQFMQIYRTFVPGWLALT LAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANMFDFLNTILGCYANCGMAWVVAV ASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKG KYYLRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60657; Mature: 60525
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGVITNSESPTAADHDRITATRETLEDYTLRLAPRSYRRWPPAVVGISALGGIAYLADF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCHHHCCCCCHHHHHHHHHHHHHHHHH AIGANVGITWGTANALCGIAIFALVVFVTGLPLAYYAARYNIDLDLITRGSGFGYYGSVV HHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCHHHHHH TNVIFATFTFIFFALEGSIMAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLW HHHHHHHHHHHHHHHCCHHHHHHHHHCEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TTPLWLILMAAPFGYLVVSHPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAE HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QIDYLRFMPPRTPENANRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIAN HHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC QPVHQFMQIYRTFVPGWLALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGR CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECHHHHHHHHCCCCE VVFLGVNLAIALILMEANMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPE EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCH FRRGMLYAINPVGFGSLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATK HHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC GKYYLRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTD CCEEEEECCCCCCCCCCCCCCCCCHHEEEEHHHHHCCCCCCCEEECCCCHHHHHHHHCCC KQAEHVLPGLARAHIPGDQVP CHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure PGVITNSESPTAADHDRITATRETLEDYTLRLAPRSYRRWPPAVVGISALGGIAYLADF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCHHHCCCCCHHHHHHHHHHHHHHHHH AIGANVGITWGTANALCGIAIFALVVFVTGLPLAYYAARYNIDLDLITRGSGFGYYGSVV HHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCHHHHHH TNVIFATFTFIFFALEGSIMAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLW HHHHHHHHHHHHHHHCCHHHHHHHHHCEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TTPLWLILMAAPFGYLVVSHPDSIGQFFSYAGKDGHGGLSFGSVLLAAGVCLSLIAQIAE HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QIDYLRFMPPRTPENANRWWTWTLLAGPGWVAFGATKQIIGLFLAVYLMANIPGSSTIAN HHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC QPVHQFMQIYRTFVPGWLALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGR CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEECHHHHHHHHCCCCE VVFLGVNLAIALILMEANMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPE EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCH FRRGMLYAINPVGFGSLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATK HHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC GKYYLRRTHDGIDLPMYDEHGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTD CCEEEEECCCCCCCCCCCCCCCCCHHEEEEHHHHHCCCCCCCEEECCCCHHHHHHHHCCC KQAEHVLPGLARAHIPGDQVP CHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA