Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637897
Identifier: 121637897
GI number: 121637897
Start: 2239179
End: 2239796
Strand: Direct
Name: 121637897
Synonym: BCG_2030
Alternate gene names: NA
Gene position: 2239179-2239796 (Clockwise)
Preceding gene: 121637896
Following gene: 121637898
Centisome position: 51.19
GC content: 71.04
Gene sequence:
>618_bases GTGTCGATCGTCGATGCGCGTGGGCGCGAGGTTCGCCGCGCCACGATCGAGCACAACGCCGCCGGACTGCGCGAGCTGCT CGAGCTGCTGAGCCGGGCCGGTGCCCGCGAGGTCGCCATCGAACGCCCGGACGGCCCGGTCGTGGATACCCTGCTCGAGG CCGGGATCACGGTGGTGGTGATCAGCCCCAACCAGCTGAAGAATCTGCGCGGTCGTTACGGCTCGGCTGGCAACAAGGAC GACCGGTTCGACGCGTTCGTGCTCGCCGACACGTTGCGCACCGACCGGTCCCGGCTGCGCCCCCTGCTGCCCGACACCCC GGCCACGGCCACCCTGCGCCGGACCTGCCGCCCCCGCAAAGACCTCGTCGCCCACCGGGTTGCGTTGGCCAATCAGCTGC GCGCGCACCTGCGCGTCGTCTTTCCGGGTGTGGGGTTGTTCGCTGACCTTGACTCGCCGATCAGCCTCGCGTTTTTGACG TTTTTGCCCCGTTTCGACTGCCAGGACCGCGCGGACTGGCTGTCGGTCAAGCGCCTGGCCGGCTGGCTGGCCGCCGCTGG CTACTGCGGCCGTGCTCCACGACCGGCTCACCGGTGCCCCGCGCGGCGCCACCGGTGA
Upstream 100 bases:
>100_bases GACGAGCGCCGAACAGTGAGCGGCCCAAACCACTACCCTGCCCGACGAGCCGCGGAACGGCGTCACGGGTGGAATCGATT GGGCGCGAGATGATCACGCG
Downstream 100 bases:
>100_bases CGAGGGTGCCGCCAACGCCCACATCACCCGGGCCATGGTCGCCGCGCTCACCAGCGTCGCGACCCAGATCAAGACGCTCG ACGCGCAGATCGCCGAGCAG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKD DRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVGLFADLDSPISLAFLT FLPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Sequences:
>Translated_205_residues MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKD DRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVGLFADLDSPISLAFLT FLPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR >Mature_204_residues SIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVVISPNQLKNLRGRYGSAGNKDD RFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRKDLVAHRVALANQLRAHLRVVFPGVGLFADLDSPISLAFLTF LPRFDCQDRADWLSVKRLAGWLAAAGYCGRAPRPAHRCPARRHR
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002525 [H]
Pfam domain/function: PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 22769; Mature: 22637
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEE ISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRK ECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH DLVAHRVALANQLRAHLRVVFPGVGLFADLDSPISLAFLTFLPRFDCQDRADWLSVKRLA HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH GWLAAAGYCGRAPRPAHRCPARRHR HHHHHHHCCCCCCCCHHCCCCCCCC >Mature Secondary Structure SIVDARGREVRRATIEHNAAGLRELLELLSRAGAREVAIERPDGPVVDTLLEAGITVVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEE ISPNQLKNLRGRYGSAGNKDDRFDAFVLADTLRTDRSRLRPLLPDTPATATLRRTCRPRK ECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH DLVAHRVALANQLRAHLRVVFPGVGLFADLDSPISLAFLTFLPRFDCQDRADWLSVKRLA HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH GWLAAAGYCGRAPRPAHRCPARRHR HHHHHHHCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]