Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637898
Identifier: 121637898
GI number: 121637898
Start: 2239750
End: 2240340
Strand: Direct
Name: 121637898
Synonym: BCG_2031
Alternate gene names: NA
Gene position: 2239750-2240340 (Clockwise)
Preceding gene: 121637897
Following gene: 121637900
Centisome position: 51.2
GC content: 70.56
Gene sequence:
>591_bases GTGCTCCACGACCGGCTCACCGGTGCCCCGCGCGGCGCCACCGGTGACGAGGGTGCCGCCAACGCCCACATCACCCGGGC CATGGTCGCCGCGCTCACCAGCGTCGCGACCCAGATCAAGACGCTCGACGCGCAGATCGCCGAGCAGCTCTCCTTGCACG CCGACGCGCATATCTTCACCTCCCTGCCCCGCTCCGGCACCGTCCGCGCCGCCCGGCTGCTCGCCGAGATCGGGGACTGC CGAGCCCGTTTCCCCACGCCCGAATCGTTGGCCTGCCTGGCTGGCGTCGCCCCCTCCACCCGTCAGTCCGGCAAAGTCAA ACACGTCGGATTCCGTTGGGCCGCAGACAAACAACTCCGCGACGCCGTCTGCGACTTCGCCGGTGACAGCCGCCGAGCCA ACCTCTGGGCCGCCGACCGCTACAACCGCGCCATCGCCCGAGGACACGACCACCCCCACGCCGTGCGCATCCTGGCCCGC GCCTGGCTCTACGCCATCTGGCACTGCTGGCAAGACGGCGCCGCCTACCACCCTGCCAACCATCGCGCCCTCCAGGCACT GCTCAACCAAGATCAAGACCGGGCGGCTTGA
Upstream 100 bases:
>100_bases TTTTTGACGTTTTTGCCCCGTTTCGACTGCCAGGACCGCGCGGACTGGCTGTCGGTCAAGCGCCTGGCCGGCTGGCTGGC CGCCGCTGGCTACTGCGGCC
Downstream 100 bases:
>100_bases CACACGGCTACTCATCGGCCTAGCGGGTGGGCGCCACCAGCGGGTAGCACGAACGAAATCCTTGATGCCCCAAACCGTTT AAGCGTTACTGCAGGGTACA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLHDRLTGAPRGATGDEGAANAHITRAMVAALTSVATQIKTLDAQIAEQLSLHADAHIFTSLPRSGTVRAARLLAEIGDC RARFPTPESLACLAGVAPSTRQSGKVKHVGFRWAADKQLRDAVCDFAGDSRRANLWAADRYNRAIARGHDHPHAVRILAR AWLYAIWHCWQDGAAYHPANHRALQALLNQDQDRAA
Sequences:
>Translated_196_residues MLHDRLTGAPRGATGDEGAANAHITRAMVAALTSVATQIKTLDAQIAEQLSLHADAHIFTSLPRSGTVRAARLLAEIGDC RARFPTPESLACLAGVAPSTRQSGKVKHVGFRWAADKQLRDAVCDFAGDSRRANLWAADRYNRAIARGHDHPHAVRILAR AWLYAIWHCWQDGAAYHPANHRALQALLNQDQDRAA >Mature_196_residues MLHDRLTGAPRGATGDEGAANAHITRAMVAALTSVATQIKTLDAQIAEQLSLHADAHIFTSLPRSGTVRAARLLAEIGDC RARFPTPESLACLAGVAPSTRQSGKVKHVGFRWAADKQLRDAVCDFAGDSRRANLWAADRYNRAIARGHDHPHAVRILAR AWLYAIWHCWQDGAAYHPANHRALQALLNQDQDRAA
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 21349; Mature: 21349
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHDRLTGAPRGATGDEGAANAHITRAMVAALTSVATQIKTLDAQIAEQLSLHADAHIFT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SLPRSGTVRAARLLAEIGDCRARFPTPESLACLAGVAPSTRQSGKVKHVGFRWAADKQLR CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEECEECCCCHHHH DAVCDFAGDSRRANLWAADRYNRAIARGHDHPHAVRILARAWLYAIWHCWQDGAAYHPAN HHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH HRALQALLNQDQDRAA HHHHHHHHCCCCCCCC >Mature Secondary Structure MLHDRLTGAPRGATGDEGAANAHITRAMVAALTSVATQIKTLDAQIAEQLSLHADAHIFT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SLPRSGTVRAARLLAEIGDCRARFPTPESLACLAGVAPSTRQSGKVKHVGFRWAADKQLR CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEECEECCCCHHHH DAVCDFAGDSRRANLWAADRYNRAIARGHDHPHAVRILARAWLYAIWHCWQDGAAYHPAN HHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH HRALQALLNQDQDRAA HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2821490; 12000953 [H]